RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 KDELR3O43731 214 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ATXN1LP0C7T5 689 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 HOXD8P13378 290 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 STC1P52823 247 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 BNIP3Q12983 259 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 INAQ16352 499 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CLLU1OSQ5K130 101 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ELMSAN1Q6PJG2 1045 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 UBE2Q1Q7Z7E8 422 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 HS6ST3Q8IZP7 471 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 LRRC58Q96CX6 371 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MAELQ96JY0 434 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 NAA50Q9GZZ1 169 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CXorf21Q9HAI6 301 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF490Q9ULM2 529 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 TARM1B6A8C7 271 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 UBFD1O14562 309 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 KERAO60938 352 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 NUP107P57740 925 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 HPCAP84074 193 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MGAT3Q09327 533 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PWP1Q13610 501 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 GTF2H2Q13888 395 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SELPLGQ14242 412 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MEP1AQ16819 746 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 GTF2H2CQ6P1K8 395 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF574Q6ZN55 896 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SLC24A5Q71RS6 500 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PROSER1Q86XN7 944 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SUN3Q8TAQ9 357 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 C12orf43Q96C57 262 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ZIC5Q96T25 663 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OSBPL6Q9BZF3 934 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SMURF2Q9HAU4 748 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SMOXQ9NWM0 555 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PCDHGB4Q9UN71 923 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SCML2Q9UQR0 700 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 INVSQ9Y283 1065 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PCDHGB5Q9Y5G0 923 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 TNFRSF10BO14763 440 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MLYCDO95822 493 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 DAB2P98082 770 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ABRQ12979 859 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 LAPTM4AQ15012 233 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 FAM69BQ5VUD6 431 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 RETSATQ6NUM9 610 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ABRAXAS1Q6UWZ7 409 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ANKS3Q6ZW76 656 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 HORMAD1Q86X24 394 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 IFNL1Q8IU54 200 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CHERPQ8IWX8 916 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PNPT1Q8TCS8 783 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ADGRE3Q9BY15 652 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MAGEH1Q9H213 219 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 DDX28Q9NUL7 540 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SUCOQ9UBS9 1254 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ADGRE2Q9UHX3 823 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OAZ3Q9UMX2 235 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 K7ERQ8 282 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 MANBAO00462 879 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 NDUFB5O43674 189 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PRKD3O94806 890 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SNAP29O95721 258 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CYBBP04839 570 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 DNAJB1P25685 340 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ELK4P28324 431 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CDK9P50750 372 aaKnown RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 KPNA1P52294 538 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 C21orf59P57076 290 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ATP6AP1Q15904 470 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 FUT10Q6P4F1 479 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CHST15Q7LFX5 561 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SFRP1Q8N474 314 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 HSPBAP1Q96EW2 488 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 APOLD1Q96LR9 279 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ALG2Q9H553 416 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 RUBCNLQ9H714 662 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 TBC1D23Q9NUY8 699 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 C2orf78A6NCI8 922 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 DRGXA6NNA5 263 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 WASH4PA8MWX3 477 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 C1RP00736 705 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CYBAP13498 195 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 IDO1P14902 403 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 GJA1P17302 382 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PPP3CCP48454 512 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CCR3P51677 355 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ADAM17P78536 824 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CACNG1Q06432 222 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 HSPA14Q0VDF9 509 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 LRRC73Q5JTD7 316 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 NADSYN1Q6IA69 706 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 C11orf74Q86VG3 221 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CCDC54Q8NEL0 328 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 OR10A6Q8NH74 314 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 L3HYPDHQ96EM0 354 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SLC39A13Q96H72 371 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PPP3R2Q96LZ3 170 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 LRFN1Q9P244 771 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms