RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CLPPQ16740 277 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 QPCTQ16769 361 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 RNASEH2BQ5TBB1 312 aaKnown RBP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 IYDQ6PHW0 289 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF765Q7L2R6 523 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 ARHGAP22Q7Z5H3 698 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 IL22RA1Q8N6P7 574 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 CNTD1Q8N815 330 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 ZSCAN1Q8NBB4 408 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 LPCAT1Q8NF37 534 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 FBXO25Q8TCJ0 367 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 CPT1BQ92523 772 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 FCRL5Q96RD9 977 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 FMO2Q99518 471 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 SLC38A3Q99624 504 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 DDA1Q9BW61 102 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 TBC1D10AQ9BXI6 508 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 GLOD4Q9HC38 313 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 EIF2B3Q9NR50 452 aaKnown RBP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 GEMIN8Q9NWZ8 242 aaKnown RBP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 AKAP7Q9P0M2 348 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 HEMK1Q9Y5R4 338 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 PRRC2CQ9Y520 2896 aaKnown RBP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 C1orf232A0A0U1RR37 186 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 LOC101059948A0A1B0GTJ6 334 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 B4E171 279 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 AP3B1O00203 1094 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 SNX2O60749 519 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 PIRTP0C851 137 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 ACP5P13686 325 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF30P17039 623 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 TPSB2P20231 275 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 NFKBIAP25963 317 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 CD68P34810 354 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-202ENST00000396828 TSPAN7P41732 249 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 CD86P42081 329 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 MAGEA6P43360 314 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 TNNT3P45378 269 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-202ENST00000396828 SPINT3P49223 89 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 EPHB1P54762 984 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 GEMP55040 296 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 GPLD1P80108 840 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 HHEXQ03014 270 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 GALNT3Q14435 633 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 KCNJ11Q14654 390 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 TPSAB1Q15661 275 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 COLEC12Q5KU26 742 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 HENMT1Q5T8I9 393 aaKnown RBP10.18□□□□□ -0.78
NEDD8-202ENST00000396828 ATP1A1-AS1Q5TC04 95 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 EMBQ6PCB8 327 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 XKR5Q6UX68 686 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 ZDHHC24Q6UX98 284 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 LINC00523Q86TU6 105 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 NRSN1Q8IZ57 195 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 CACNA2D3Q8IZS8 1091 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 NAT8LQ8N9F0 302 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 NCSTNQ92542 709 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 LYSMD1Q96S90 227 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 SLC25A18Q9H1K4 315 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 SLC25A51Q9H1U9 297 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 LRRC40Q9H9A6 602 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 PRDM8Q9NQV8 689 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 ZDHHC18Q9NUE0 388 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 SCHIP1Q9P0W5 487 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-202ENST00000396828 ATXN10Q9UBB4 475 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 SLC23A2Q9UGH3 650 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 KLHL3Q9UH77 587 aa10.18□□□□□ -0.78
NEDD8-202ENST00000396828 NBASA2RRP1 2371 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ANKRD66B4E2M5 251 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 F5H423 210 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 AP2A1O95782 977 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 MYBL2P10244 700 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF28P17035 718 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ZNF8P17098 575 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ECHS1P30084 290 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 MAPK9P45984 424 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 PPM1FP49593 454 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ATP1A2P50993 1020 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 GFERP55789 205 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 POLE2P56282 527 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ARL4CP56559 192 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 MC2RQ01718 297 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 TLE1Q04724 770 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 MPP3Q13368 585 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 LRP8Q14114 963 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 SLMAPQ14BN4 828 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 HIF1AQ16665 826 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 SKIDA1Q1XH10 827 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 DCAF12Q5T6F0 453 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 BORAQ6PGQ7 559 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 WDR74Q6RFH5 385 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 ATG14Q6ZNE5 492 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 CENPUQ71F23 418 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 LYSMD3Q7Z3D4 306 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 KDELC2Q7Z4H8 507 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 GSPT2Q8IYD1 628 aaKnown RBP10.17□□□□□ -0.78
NEDD8-202ENST00000396828 PDIK1LQ8N165 341 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 NDUFAF2Q8N183 169 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 GPR26Q8NDV2 337 aa10.17□□□□□ -0.78
NEDD8-202ENST00000396828 MCUQ8NE86 351 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms