RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TIPRLO75663 272 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PIAS1O75925 651 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 KRT36O76013 467 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 AGR2O95994 175 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ILF3Q12906 894 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 KLF10Q13118 480 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PRKD1Q15139 912 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 EIPR1Q53HC9 387 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GCNT6Q5T4J0 391 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MSANTD2Q6P1R3 559 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 FAM131AQ6UXB0 335 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CEP68Q76N32 757 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SLC38A3Q99624 504 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MCMBPQ9BTE3 642 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SPATA9Q9BWV2 254 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SLC17A7Q9P2U7 560 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MAN2B2Q9Y2E5 1009 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PLIN4Q96Q06 1357 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DUXAA6NLW8 204 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SLC7A4O43246 635 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 IL12BP29460 328 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ALDH4A1P30038 563 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PDX1P52945 283 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 AMIGO2Q86SJ2 522 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MCFD2Q8NI22 146 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CPT1BQ92523 772 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TBATAQ96M53 351 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CIB1Q99828 191 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 XRN1Q8IZH2 1706 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TFPIP10646 304 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GNSP15586 552 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ITPKAP23677 461 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 AKT2P31751 481 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MAPK10P53779 464 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GBE1Q04446 702 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SNX20Q7Z614 316 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SERPINA9Q86WD7 417 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 UNC5BQ8IZJ1 945 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PDPRQ8NCN5 879 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TRPV1Q8NER1 839 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DENND1AQ8TEH3 1009 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DCAKDQ8WVC6 231 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PPM1MQ96MI6 270 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GPR21Q99679 349 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TCF25Q9BQ70 676 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GOLGA2P5Q9HBQ8 144 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DNAAF2Q9NVR5 837 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 UPB1Q9UBR1 384 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 RUVBL1Q9Y265 456 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 IQCMA0A1B0GVH7 501 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 C2CD4BA6NLJ0 364 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TLX3O43711 291 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 NOL4O94818 638 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 RASGRP1O95267 797 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ANGPTL1O95841 491 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CYP4B1P13584 511 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 AVPR1BP47901 424 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 HSPA7P48741 367 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PLA2G4EQ3MJ16 856 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SPPL2CQ8IUH8 684 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SNX33Q8WV41 574 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GPATCH1Q9BRR8 931 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TRPV5Q9NQA5 729 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PLK2Q9NYY3 685 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 A0A0G2JLL6 359 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GLTPD2A6NH11 291 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SCAMP3O14828 347 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TOP3BO95985 862 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 NAE1Q13564 534 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 RAPSNQ13702 412 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SUZ12Q15022 739 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 KLHL22Q53GT1 634 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PRRT2Q7Z6L0 340 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 HPS6Q86YV9 775 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 UNC93B1Q9H1C4 597 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 HCN3Q9P1Z3 774 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CNTN6Q9UQ52 1028 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TRMUO75648 421 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GOT2P00505 430 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GRK6P43250 576 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PPP3R1P63098 170 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 FCHO2Q0JRZ9 810 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 XKR4Q5GH76 650 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 IL23RQ5VWK5 629 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ABHD13Q7L211 337 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ADGRG6Q86SQ4 1221 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 AVL9Q8NBF6 648 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ERLEC1Q96DZ1 483 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 NSMCE3Q96MG7 304 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 WRAP53Q9BUR4 548 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CDH7Q9ULB5 785 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PDE4DIPQ5VU43 2346 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CDK5RAP2Q96SN8 1893 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 A0A0U1RQJ8 604 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 GPR25O00155 361 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 LYPLA1O75608 230 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 STBD1O95210 358 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms