RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 A0A1W2PQM1 296 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 OR52A4PA6NMU1 304 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 KIR2DS3K7RE56 304 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 USP1O94782 785 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 MT-CO3P00414 261 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 POLBP06746 335 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 TUBBP07437 444 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 F7P08709 466 aaPredicted RBP16.23■□□□□ 0.19
CXCL1-201ENST00000395761 PNLIPP16233 465 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 PGAM1P18669 254 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 XRCC1P18887 633 aaPredicted RBP16.23■□□□□ 0.19
CXCL1-201ENST00000395761 TNFRSF8P28908 595 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 ALDH4A1P30038 563 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 SLC19A1P41440 591 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 ELK3P41970 407 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 FASLGP48023 281 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 UBE2IP63279 158 aaKnown RBP16.23■□□□□ 0.19
CXCL1-201ENST00000395761 BIRC2Q13490 618 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 KIR2DS5Q14953 304 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 AARS2Q5JTZ9 985 aaKnown RBP16.23■□□□□ 0.19
CXCL1-201ENST00000395761 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.23■□□□□ 0.19
CXCL1-201ENST00000395761 CDCP2Q5VXM1 449 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 NEPROQ6NW34 567 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 ZDHHC24Q6UX98 284 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 SPRED1Q7Z699 444 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 CCNJLQ8IV13 435 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 OTUD6BQ8N6M0 293 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 TTC1Q99614 292 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 FOXP3Q9BZS1 431 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 LRRN3Q9H3W5 708 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 SARS2Q9NP81 518 aaKnown RBP16.23■□□□□ 0.19
CXCL1-201ENST00000395761 ZDHHC18Q9NUE0 388 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 CPNE7Q9UBL6 633 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 FAM169AQ9Y6X4 670 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 RP1P56715 2156 aa16.23■□□□□ 0.19
CXCL1-201ENST00000395761 C17orf113A0A1B0GUU1 675 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 ESYT3A0FGR9 886 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 FAM221BA6H8Z2 402 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 OR5K4A6NMS3 321 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 NTN3O00634 580 aaPredicted RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 CTIFO43310 598 aaKnown RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 NDUFS3O75489 264 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 RPLP0P05388 317 aaKnown RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 SLC2A4P14672 509 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 JUPP14923 745 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 ITGB6P18564 788 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 PAMP19021 973 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 PPARGP37231 505 aaPredicted RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 TTPAP49638 278 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 ARL4CP56559 192 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 SHC2P98077 582 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 HHEXQ03014 270 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 NR1D2Q14995 579 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 RPE65Q16518 533 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 HIF1AQ16665 826 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 MRNIPQ6NTE8 343 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 WDR93Q6P2C0 686 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 NAPRTQ6XQN6 538 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 SDCCAG8Q86SQ7 713 aaPredicted RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 SLC9B2Q86UD5 537 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 TMPRSS12Q86WS5 348 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 GALNT15Q8N3T1 639 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 MYRIPQ8NFW9 859 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 GPR150Q8NGU9 434 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 HM13Q8TCT9 377 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 INSM2Q96T92 566 aaPredicted RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 WWP1Q9H0M0 922 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 SYNDIG1Q9H7V2 258 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 COG4Q9H9E3 785 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 PLAC1Q9HBJ0 212 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 C20orf96Q9NUD7 363 aaPredicted RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 ANGPTL2Q9UKU9 493 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 ACSL5Q9ULC5 683 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 ATXN7L1Q9ULK2 861 aaPredicted RBP16.22■□□□□ 0.19
CXCL1-201ENST00000395761 CLCA2Q9UQC9 943 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 CHMP2BQ9UQN3 213 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 TEX264Q9Y6I9 313 aa16.22■□□□□ 0.19
CXCL1-201ENST00000395761 PTPRBP23467 1997 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 IQCF5A8MTL0 148 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 PRMT5O14744 637 aaPredicted RBP16.21■□□□□ 0.19
CXCL1-201ENST00000395761 OR56A5P0C7T3 313 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 PDHA2P29803 388 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 CARSP49589 748 aaKnown RBP16.21■□□□□ 0.19
CXCL1-201ENST00000395761 PLTPP55058 493 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 FOXK2Q01167 660 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 PDIA2Q13087 525 aaKnown RBP16.21■□□□□ 0.19
CXCL1-201ENST00000395761 TARDBPQ13148 414 aaKnown RBP eCLIP16.21■□□□□ 0.19
CXCL1-201ENST00000395761 CTBP1Q13363 440 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 CRYMQ14894 314 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 LONRF1Q17RB8 773 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 TYSND1Q2T9J0 566 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 AMZ1Q400G9 498 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 ZNF789Q5FWF6 425 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 NKAIN2Q5VXU1 208 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 CCNI2Q6ZMN8 369 aaPredicted RBP16.21■□□□□ 0.19
CXCL1-201ENST00000395761 CENPUQ71F23 418 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 ANKMY2Q8IV38 441 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 DENND6AQ8IWF6 608 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms