RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PEX2P28328 305 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 METAP1P53582 386 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 CLNS1AP54105 237 aaKnown RBP14.83□□□□□ -0.03
GPC3-202ENST00000394299 GTF2H2Q13888 395 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 RPS6KA2Q15349 733 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 DHCR24Q15392 516 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 HABP4Q5JVS0 413 aaKnown RBP14.83□□□□□ -0.03
GPC3-202ENST00000394299 GTF2H2CQ6P1K8 395 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 PSRC1Q6PGN9 363 aaPredicted RBP14.83□□□□□ -0.03
GPC3-202ENST00000394299 ADAMTSL2Q86TH1 951 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 VRK3Q8IV63 474 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 METTL6Q8TCB7 284 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 VPS33AQ96AX1 596 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 COPS8Q99627 209 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 SLC25A23Q9BV35 468 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 IPPKQ9H8X2 491 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 SPATS2LQ9NUQ6 558 aaKnown RBP14.83□□□□□ -0.03
GPC3-202ENST00000394299 FAM8A1Q9UBU6 413 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 SPTBN5Q9NRC6 3674 aaKnown RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 OTOL1A6NHN0 477 aaPredicted RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 XYLBO75191 536 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 CA3P07451 260 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 ETV3P41162 512 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 UFM1P61960 85 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 HSPA14Q0VDF9 509 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 CAPRIN1Q14444 709 aaKnown RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 SFTPA1Q8IWL2 248 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 MIER2Q8N344 545 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 DNAJC5GQ8N7S2 189 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 BEND7Q8N7W2 519 aaPredicted RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 ZNF641Q96N77 438 aaPredicted RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 TMEM79Q9BSE2 394 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 SPATA16Q9BXB7 569 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 FAM126AQ9BYI3 521 aaPredicted RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 ZDHHC3Q9NYG2 299 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 PTBP2Q9UKA9 531 aaKnown RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 GPR45Q9Y5Y3 372 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 HELZP42694 1942 aaKnown RBP14.83□□□□□ -0.04
GPC3-202ENST00000394299 EYSQ5T1H1 3165 aa14.83□□□□□ -0.04
GPC3-202ENST00000394299 GIPC1O14908 333 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 RAD51BO15315 384 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ACADSP16219 412 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 NSG1P42857 185 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 RECQLP46063 649 aaPredicted RBP14.82□□□□□ -0.04
GPC3-202ENST00000394299 RGS4P49798 205 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 PCBP2Q15366 365 aaKnown RBP eCLIP14.82□□□□□ -0.048e-8■■■□□ 17.9
GPC3-202ENST00000394299 MAPRE2Q15555 327 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 SLC44A4Q53GD3 710 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 SFT2D3Q587I9 215 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 JADE3Q92613 823 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ZNF184Q99676 751 aaPredicted RBP14.82□□□□□ -0.04
GPC3-202ENST00000394299 HEPHQ9BQS7 1158 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 CEP44Q9C0F1 390 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 PIDD1Q9HB75 910 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 TBC1D14Q9P2M4 693 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 FFAR3O14843 346 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 GPR42O15529 346 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 TIMP2P16035 220 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 SLC6A11P48066 632 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ACADVLP49748 655 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ATP4BP51164 291 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ABRAXAS2Q15018 415 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ZXDCQ2QGD7 858 aaPredicted RBP14.82□□□□□ -0.04
GPC3-202ENST00000394299 XKR7Q5GH72 579 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 NAIF1Q69YI7 327 aaPredicted RBP14.82□□□□□ -0.04
GPC3-202ENST00000394299 IL27RAQ6UWB1 636 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 SFRP1Q8N474 314 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ZNF382Q96SR6 550 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 PCDH12Q9NPG4 1184 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ZDHHC4Q9NPG8 344 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 SDR39U1Q9NRG7 319 aaPredicted RBP14.82□□□□□ -0.04
GPC3-202ENST00000394299 FARSBQ9NSD9 589 aaKnown RBP14.82□□□□□ -0.04
GPC3-202ENST00000394299 DUS2Q9NX74 493 aaKnown RBP14.82□□□□□ -0.04
GPC3-202ENST00000394299 CROTQ9UKG9 612 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 ITM2BQ9Y287 266 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 OARD1Q9Y530 152 aa14.82□□□□□ -0.04
GPC3-202ENST00000394299 TRIM38O00635 465 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 FGF19O95750 216 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 CYP17A1P05093 508 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 PRR35P0CG20 571 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 ZFP36L2P47974 494 aaKnown RBP14.81□□□□□ -0.04
GPC3-202ENST00000394299 SLC7A2P52569 658 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 CDC16Q13042 620 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 ARHGEF7Q14155 803 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 TRIP10Q15642 601 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 C6orf136Q5SQH8 315 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 C9orf50Q5SZB4 431 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 LYPLAL1Q5VWZ2 237 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 CYP2R1Q6VVX0 501 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 KIAA0907Q7Z7F0 614 aaPredicted RBP14.81□□□□□ -0.04
GPC3-202ENST00000394299 AHI1Q8N157 1196 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SKA2Q8WVK7 121 aaPredicted RBP14.81□□□□□ -0.04
GPC3-202ENST00000394299 RHBDF1Q96CC6 855 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SLC52A3Q9NQ40 469 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SLAMF8Q9P0V8 285 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 BCAS2O75934 225 aaPredicted RBP14.81□□□□□ -0.04
GPC3-202ENST00000394299 S100BP04271 92 aaPredicted RBP14.81□□□□□ -0.04
GPC3-202ENST00000394299 CISD3P0C7P0 127 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 IL12AP29459 219 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SOX11P35716 441 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms