RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PLA2G4EQ3MJ16 856 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 ZNF808Q8N4W9 903 aaPredicted RBP13.27□□□□□ -0.28
USP49-203ENST00000394253 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 HIPK3Q9H422 1215 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 PCDHB12Q9Y5F1 795 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 TCOF1Q13428 1488 aaKnown RBP13.27□□□□□ -0.28
USP49-203ENST00000394253 FARS2O95363 451 aaKnown RBP13.27□□□□□ -0.28
USP49-203ENST00000394253 MATN4O95460 622 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 ERVK-24P63145 666 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 NKAPLQ5M9Q1 402 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 DNM1P34Q6PK57 102 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 OR6K6Q8NGW6 343 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 BRSK1Q8TDC3 778 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 TARS2Q9BW92 718 aaKnown RBP13.27□□□□□ -0.28
USP49-203ENST00000394253 BRD9Q9H8M2 597 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 GDAP2Q9NXN4 497 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 ERBB3P21860 1342 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 ATP7AQ04656 1500 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 RAB4BP61018 213 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 CNTD1Q8N815 330 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 PARK7Q99497 189 aaKnown RBP13.27□□□□□ -0.29
USP49-203ENST00000394253 NINJ2Q9NZG7 142 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 LCHNA4D1U4 455 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 POMCP01189 267 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 CYP3A4P08684 503 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 ALKBH2Q6NS38 261 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 KCNT2Q6UVM3 1135 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 ZC3HC1Q86WB0 502 aaKnown RBP13.27□□□□□ -0.29
USP49-203ENST00000394253 EBNA1BP2Q99848 306 aaKnown RBP13.27□□□□□ -0.29
USP49-203ENST00000394253 OSGEPQ9NPF4 335 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 TAS2R10Q9NYW0 307 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 GSKIPQ9P0R6 139 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 PEX11AO75192 247 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 MT-CO2P00403 227 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 CSTBP04080 98 aaKnown RBP13.27□□□□□ -0.29
USP49-203ENST00000394253 TPH1P17752 444 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 GNAZP19086 355 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 CYP2C18P33260 490 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 RYKP34925 604 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 GRK6P43250 576 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 SPP2Q13103 211 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 SMARCD3Q6STE5 483 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 PTGR2Q8N8N7 351 aaPredicted RBP13.27□□□□□ -0.29
USP49-203ENST00000394253 CGRRF1Q99675 332 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 NME7Q9Y5B8 376 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 CTXN3Q4LDR2 81 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 SLC9B2Q86UD5 537 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 ARHGAP12Q8IWW6 846 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 CLIP4Q8N3C7 705 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 ADAMTS15Q8TE58 950 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 TMEM106CQ9BVX2 250 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
USP49-203ENST00000394253 UBXN7O94888 489 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 CAP2P40123 477 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 FNDC3BQ53EP0 1204 aaKnown RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 VTCN1Q7Z7D3 282 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 RBFAQ8N0V3 343 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 ZNF366Q8N895 744 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 ATP13A1Q9HD20 1204 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP49-203ENST00000394253 CACNA1DQ01668 2161 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 ATE1O95260 518 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 PRDX6P30041 224 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 NCCRP1Q6ZVX7 275 aaPredicted RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 PLK2Q9NYY3 685 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 KANSL3Q9P2N6 904 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 CDH10Q9Y6N8 788 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 BAZ2AQ9UIF9 1905 aaKnown RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 ABL2P42684 1182 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 DPYSL3Q14195 570 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 KCTD19Q17RG1 926 aaPredicted RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 ELOVL4Q9GZR5 314 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 ZNHIT2Q9UHR6 403 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 FAM230AA0A1W2PPH8 454 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 DAPL1A0PJW8 107 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 VEGFCP49767 419 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 ORC1Q13415 861 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 DOK6Q6PKX4 331 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 C12orf65Q9H3J6 166 aaKnown RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 ARMC1Q9NVT9 282 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 AP1M2Q9Y6Q5 423 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 TFEBP19484 476 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 MPZL3Q6UWV2 235 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 ASB8Q9H765 288 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 CNOT6Q9ULM6 557 aaKnown RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 PLEKHM1Q9Y4G2 1056 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 IFNA5P01569 189 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 MASP1P48740 699 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 CLCN7P51798 805 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 ACVR2BQ13705 512 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 PTGR1Q14914 329 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 TSPAN33Q86UF1 283 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
USP49-203ENST00000394253 EIF1AYO14602 144 aaKnown RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 EIF1AXP47813 144 aaKnown RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 AUHQ13825 339 aaKnown RBP13.26□□□□□ -0.29
USP49-203ENST00000394253 CBR4Q8N4T8 237 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms