RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SLC38A4Q969I6 547 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SKA1Q96BD8 255 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SNX27Q96L92 541 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 FZD8Q9H461 694 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SP140LQ9H930 580 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 RRAGCQ9HB90 399 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 EQTNQ9NQ60 294 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 GIN1Q9NXP7 522 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 CFAP97Q9P2B7 532 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 FKBPLQ9UIM3 349 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 PADI3Q9ULW8 664 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 TESMINQ9Y4I5 508 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 TLL2Q9Y6L7 1015 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 ABHD14A-ACY1A0A1B0GW23 586 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 TSPAN9O75954 239 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 LAMP2P13473 410 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 XRCC1P18887 633 aaPredicted RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 FAUP35544 74 aaKnown RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 GRIA1P42261 906 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 NRLP54845 237 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 RPS14P62263 151 aaKnown RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 FCHO2Q0JRZ9 810 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 MPPE1Q53F39 396 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 FAM171BQ6P995 826 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 FAM83DQ9H4H8 585 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 MRPS33Q9Y291 106 aaKnown RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 A0A1W2PQ67 120 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 MAGEB17A8MXT2 336 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 STX16-NPEPL1H3BU86 382 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 STX16O14662 325 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 GRM6O15303 877 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 MNDAP41218 407 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 CHRNA4P43681 627 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 ZNF132P52740 706 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 RTL4Q6ZR62 310 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SIX5Q8N196 739 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 TOP1MTQ969P6 601 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 ASB9Q96DX5 294 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 CITED4Q96RK1 184 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 ELL3Q9HB65 397 aaPredicted RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 PPM1HQ9ULR3 514 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 NR2E3Q9Y5X4 410 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 GABRDO14764 452 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 PER2O15055 1255 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SCN2BO60939 215 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 C22orf31O95567 290 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 RLN1P04808 185 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SAGP10523 405 aaPredicted RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 ALDH4A1P30038 563 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 PPM1AP35813 382 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 CCNFP41002 786 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 RGS8P57771 180 aaPredicted RBP12.97□□□□□ -0.33
LCA5-202ENST00000392959 DLG1Q12959 904 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 TXNRD3NBQ6F5E7 133 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SLC24A5Q71RS6 500 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 OAFQ86UD1 273 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 SERPINA9Q86WD7 417 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 MPP5Q8N3R9 675 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 CANT1Q8WVQ1 401 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 ZNF516Q92618 1163 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 FCRL5Q96RD9 977 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 COPS4Q9BT78 406 aa12.97□□□□□ -0.33
LCA5-202ENST00000392959 CXorf49A8MYA2 514 aaPredicted RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 KLF11O14901 512 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 ITM2AO43736 263 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 YAP1P46937 504 aaKnown RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 CDH4P55283 916 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 TEAD4Q15561 434 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 SCAIQ8N9R8 606 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 ART5Q96L15 291 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 TMEM165Q9HC07 324 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 SLIT3O75094 1523 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 FAM234BA2RU67 622 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 TOR1BO14657 336 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 SNX4O95219 450 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 TOP3BO95985 862 aaKnown RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 AP1S1P61966 158 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 IRF9Q00978 393 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 KLF1Q13351 362 aaPredicted RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 SUZ12Q15022 739 aaKnown RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 MED27Q6P2C8 311 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 PARGQ86W56 976 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 SLC43A3Q8NBI5 491 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 SRFBP1Q8NEF9 429 aaKnown RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 FCRL4Q96PJ5 515 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 SLC17A6Q9P2U8 582 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 NKX1-2Q9UD57 310 aaPredicted RBP12.96□□□□□ -0.33
LCA5-202ENST00000392959 CLEC4AQ9UMR7 237 aa12.96□□□□□ -0.33
LCA5-202ENST00000392959 IQCMA0A1B0GVH7 501 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 NEDD8-MDP1E9PL57 170 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 RAB15P59190 212 aa12.96□□□□□ -0.34
LCA5-202ENST00000392959 ERVK-8P63133 956 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms