RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 PCDHA3Q9Y5H8 950 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 EPN1Q9Y6I3 576 aaPredicted RBP16.23■□□□□ 0.19
PTPRK-208ENST00000392449 TERTO14746 1132 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 WISP1O95388 367 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 RBP3P10745 1247 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 MSH3P20585 1137 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 LPOP22079 712 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 FECHP22830 423 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 CCR10P46092 362 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ZNF75DP51815 510 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 PLCL1Q15111 1095 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 TAF1AQ15573 450 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 COLEC12Q5KU26 742 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 RANBP10Q6VN20 620 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ESX1Q8N693 406 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 OR13C4Q8NGS5 318 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 DTX3LQ8TDB6 740 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 KLHL6Q8WZ60 621 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ZDHHC12Q96GR4 267 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 INSM2Q96T92 566 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 SMOXQ9NWM0 555 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 LNPEPQ9UIQ6 1025 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 CROTQ9UKG9 612 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 SPENQ96T58 3664 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 A0A0U1RQJ8 604 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 TOX3O15405 576 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 SGTAO43765 313 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ANXA9O76027 345 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 SRP72O76094 671 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 FURINP09958 794 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 PYGMP11217 842 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 MTHFD1P11586 935 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 SFTPCP11686 197 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 FOLR1P15328 257 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 NELFEP18615 380 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 DLSTP36957 453 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ARCN1P48444 511 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 XIAPP98170 497 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 KCNC4Q03721 635 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ITPRIPL1Q6GPH6 555 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 DARS2Q6PI48 645 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 C6orf15Q6UXA7 325 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ATG14Q6ZNE5 492 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 TMEM135Q86UB9 458 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 CDKL3Q8IVW4 592 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 RBM12BQ8IXT5 1001 aaKnown RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ASB8Q9H765 288 aa16.22■□□□□ 0.19
PTPRK-208ENST00000392449 ZNF71Q9NQZ8 489 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPRK-208ENST00000392449 GRID2IPA4D2P6 1211 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 DDX3YO15523 660 aaKnown RBP16.21■□□□□ 0.19
PTPRK-208ENST00000392449 SPAG6O75602 509 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 EBLN1P0CF75 366 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 TCN2P20062 427 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 CTNNA2P26232 953 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 COPS2P61201 443 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 LONRF2Q1L5Z9 754 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 SKIDA1Q1XH10 827 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 METRNLQ641Q3 311 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 DENND5AQ6IQ26 1287 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 FBXO38Q6PIJ6 1188 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 STAMBPL1Q96FJ0 436 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 C12orf66Q96MD2 445 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 PPM1MQ96MI6 270 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 PANX2Q96RD6 677 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 NRTNQ99748 197 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 MAP3K3Q99759 626 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 RBSNQ9H1K0 784 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 ADNPQ9H2P0 1102 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 TRIT1Q9H3H1 467 aaKnown RBP16.21■□□□□ 0.19
PTPRK-208ENST00000392449 EPHA6Q9UF33 1036 aa16.21■□□□□ 0.19
PTPRK-208ENST00000392449 PACSIN2Q9UNF0 486 aaPredicted RBP16.21■□□□□ 0.19
PTPRK-208ENST00000392449 UBR5O95071 2799 aaPredicted RBP16.2■□□□□ 0.18
PTPRK-208ENST00000392449 C2orf81A6NN90 581 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 KCNJ13O60928 360 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 KATNA1O75449 491 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 POLBP06746 335 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 PRSS56P0CW18 603 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 FGF5P12034 268 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 CDKN1CP49918 316 aaPredicted RBP16.2■□□□□ 0.18
PTPRK-208ENST00000392449 ZNF140P52738 457 aaPredicted RBP16.2■□□□□ 0.18
PTPRK-208ENST00000392449 RWDD2BP57060 319 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 TUBB3Q13509 450 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 MAP7Q14244 749 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 IL11RAQ14626 422 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 PWWP2BQ6NUJ5 590 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 LRRC57Q8N9N7 239 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 RMDN2Q96LZ7 410 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 SPATA13Q96N96 652 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 CATSPER2Q96P56 530 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 RUFY1Q96T51 708 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 RAB33BQ9H082 229 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 AKIRIN1Q9H9L7 192 aaPredicted RBP16.2■□□□□ 0.18
PTPRK-208ENST00000392449 LUC7LQ9NQ29 371 aaKnown RBP16.2■□□□□ 0.18
PTPRK-208ENST00000392449 CRLS1Q9UJA2 301 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 COL12A1Q99715 3063 aa16.2■□□□□ 0.18
PTPRK-208ENST00000392449 OR5K3A6NET4 321 aa16.19■□□□□ 0.18
PTPRK-208ENST00000392449 MGAT4DA6NG13 374 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms