RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 XIRP2A4UGR9 3374 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 PRKD3O94806 890 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 CAPN1P07384 714 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 GDF5P43026 501 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 GRSF1Q12849 480 aaKnown RBP eCLIP17.78■□□□□ 0.44
ERCC2-201ENST00000391941 UPP1Q16831 310 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 COQ5Q5HYK3 327 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 C1QTNF12Q5T7M4 302 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 ZDHHC13Q8IUH4 622 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 KRTCAP2Q8N6L1 136 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 AARSD1Q9BTE6 412 aaKnown RBP17.78■□□□□ 0.44
ERCC2-201ENST00000391941 LRRC3Q9BY71 257 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 ZNF639Q9UID6 485 aa17.78■□□□□ 0.44
ERCC2-201ENST00000391941 FTH1P02794 183 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 HOXD12P35452 270 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 NCS1P62166 190 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 HMGCS1Q01581 520 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 NR6A1Q15406 480 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 MS4A13Q5J8X5 152 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 C6orf141Q5SZD1 244 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 LAIR1Q6GTX8 287 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 PSAPL1Q6NUJ1 521 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 TMEM53Q6P2H8 277 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 EFHBQ8N7U6 833 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 TRUB1Q8WWH5 349 aaKnown RBP17.77■□□□□ 0.44
ERCC2-201ENST00000391941 MTFMTQ96DP5 389 aaKnown RBP17.77■□□□□ 0.44
ERCC2-201ENST00000391941 ZNF599Q96NL3 588 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 FLRT1Q9NZU1 646 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 TMEM9Q9P0T7 183 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 DNMT3BQ9UBC3 853 aaKnown RBP17.77■□□□□ 0.44
ERCC2-201ENST00000391941 PCTPQ9UKL6 214 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 PDE10AQ9Y233 779 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 GSTT2P0CG29 244 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 GSTT2BP0CG30 244 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 TMBIM6P55061 237 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 ADAM17P78536 824 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 EMX2Q04743 252 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 SLC39A12Q504Y0 691 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 FBXL22Q6P050 247 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 STAG3L4Q8TBR4 150 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 NCLNQ969V3 563 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 RMDN1Q96DB5 314 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 CDKN2AIPNLQ96HQ2 116 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 TUBA1CQ9BQE3 449 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 FEM1AQ9BSK4 669 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 ERVK-18Q9QC07 812 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 NEUROG3Q9Y4Z2 214 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 COMMD10Q9Y6G5 202 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.44
ERCC2-201ENST00000391941 TNPO2O14787 897 aaKnown RBP17.77■□□□□ 0.43
ERCC2-201ENST00000391941 STC1P52823 247 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 CRYBB1P53674 252 aaPredicted RBP17.77■□□□□ 0.43
ERCC2-201ENST00000391941 CHRNB3Q05901 458 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 SLC13A2Q13183 592 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 NIPAL1Q6NVV3 410 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 ANKRD46Q86W74 232 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 LGI2Q8N0V4 545 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 GLMNQ92990 594 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 RPRD1AQ96P16 312 aaPredicted RBP17.77■□□□□ 0.43
ERCC2-201ENST00000391941 YTHDF1Q9BYJ9 559 aaKnown RBP17.77■□□□□ 0.43
ERCC2-201ENST00000391941 ITM2CQ9NQX7 267 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 MTRRQ9UBK8 725 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.77■□□□□ 0.43
ERCC2-201ENST00000391941 ADGRE2Q9UHX3 823 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 GNPTGQ9UJJ9 305 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 SLC30A1Q9Y6M5 507 aa17.77■□□□□ 0.43
ERCC2-201ENST00000391941 SOBPA7XYQ1 873 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 KERAO60938 352 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 E2F6O75461 281 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 UMPSP11172 480 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 EPHA2P29317 976 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 PSEN2P49810 448 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 ABRAXAS2Q15018 415 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 CTF1Q16619 201 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 INAVAQ3KP66 663 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 ADPRMQ3LIE5 342 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 MRNIPQ6NTE8 343 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 HID1Q8IV36 788 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 METTL6Q8TCB7 284 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 RAB2BQ8WUD1 216 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 LINGO1Q96FE5 620 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 ZNF583Q96ND8 569 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 MUC13Q9H3R2 512 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 ABCC13Q9NSE7 274 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 MOXD2PA6NHM9 499 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 GSTA4O15217 222 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 TLR5O60602 858 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 JRKO75564 520 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 CDH1P12830 882 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 ARPP19P56211 112 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 IL5RAQ01344 420 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 AASDHQ4L235 1098 aaPredicted RBP17.76■□□□□ 0.43
ERCC2-201ENST00000391941 CATSPEREQ5SY80 951 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 OVOS1Q6IE37 1185 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 GCNT7Q6ZNI0 430 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 KIAA1191Q96A73 305 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 CGREF1Q99674 301 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 GMIPQ9P107 970 aa17.76■□□□□ 0.43
ERCC2-201ENST00000391941 PMF1-BGLAPU3KQ54 211 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms