RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 TCF19Q9Y242 345 aa2.9□□□□□ -1.95
RNU6-550P-201ENST00000391057 TCF20Q9UGU0 1960 aaKnown RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 hCG_1807616A0A1W2PRN6 198 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 LNP1A1A4G5 178 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 PRR23AA6NEV1 266 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 GPR137BO60478 399 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 CAVIN2O95810 425 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 NR3C1P04150 777 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 VPREB1P12018 145 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 PAX1P15863 534 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 NR1D1P20393 614 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 TCEA1P23193 301 aaKnown RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 TIMP3P35625 211 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 NRIP1P48552 1158 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 SUOXP51687 545 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 ARSEP51690 589 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 TMF1P82094 1093 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 EPS8Q12929 822 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 RALBP1Q15311 655 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 KRTAP24-1Q3LI83 254 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 FAM98BQ52LJ0 330 aaKnown RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 SPATA1Q5VX52 437 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 ADALQ6DHV7 355 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 FAM109BQ6ICB4 259 aaPredicted RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 INTS8Q75QN2 995 aaKnown RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 TAGAPQ8N103 731 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 CNBD1Q8NA66 436 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 POC5Q8NA72 575 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 KLHDC9Q8NEP7 349 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 SPATA3Q8NHX4 192 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 TBC1D16Q8TBP0 767 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 GRAPLQ8TC17 118 aaPredicted RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 ZNF473Q8WTR7 871 aaKnown RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 TM9SF4Q92544 642 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 JAKMIP2Q96AA8 810 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 PRMT6Q96LA8 375 aaPredicted RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 PAFAH2Q99487 392 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 APOBEC3GQ9HC16 384 aaKnown RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 ZBTB20Q9HC78 741 aaPredicted RBP2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 ARHGEF38Q9NXL2 777 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 NSMCE4AQ9NXX6 385 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 PSD3Q9NYI0 1048 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 TMEM5Q9Y2B1 443 aa2.89□□□□□ -1.95
RNU6-550P-201ENST00000391057 OR2A25A4D2G3 310 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PAPSS1O43252 624 aaPredicted RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 SYNCRIPO60506 623 aaKnown RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 SOCS5O75159 536 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 GJB3O75712 270 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 GFPT2O94808 682 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 GCNT3O95395 438 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PLGP00747 810 aaPredicted RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 LDLRP01130 860 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 H1F0P07305 194 aaKnown RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 TUBBP07437 444 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PORP16435 677 aaPredicted RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 CKMT2P17540 419 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 SAT1P21673 171 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 CDKN1AP38936 164 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 DCTP40126 519 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PSMC4P43686 418 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 NR2C2P49116 596 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PNLIPRP2P54317 469 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 LINC01547P58512 204 aaPredicted RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 CXCL9Q07325 125 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PLA2G7Q13093 441 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 MFAP5Q13361 173 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 OTUD3Q5T2D3 398 aaPredicted RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 GCNT6Q5T4J0 391 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 SFMBT2Q5VUG0 894 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 ALS2CLQ60I27 953 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PLA2G4FQ68DD2 849 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 SLC35E4Q6ICL7 350 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 KLC3Q6P597 504 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 SLC27A1Q6PCB7 646 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 TMCO3Q6UWJ1 677 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 CEACAM20Q6UY09 585 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 DGLUCYQ7Z3D6 616 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 HAUS6Q7Z4H7 955 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 AACSQ86V21 672 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 GPALPP1Q8IXQ4 340 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 STPG4Q8N801 248 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 FBXO17Q96EF6 278 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 ZNF582Q96NG8 517 aaPredicted RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PGLYRP2Q96PD5 576 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 SLC22A12Q96S37 553 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 KIFC3Q9BVG8 833 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 TEX12Q9BXU0 123 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 OSGEPL1Q9H4B0 414 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 BICC1Q9H694 974 aaKnown RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 HHATLQ9HCP6 504 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 HACL1Q9UJ83 578 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 PLAGL1Q9UM63 463 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 ZNF148Q9UQR1 794 aa2.88□□□□□ -1.95
RNU6-550P-201ENST00000391057 RSF1Q96T23 1441 aaPredicted RBP2.87□□□□□ -1.95
RNU6-550P-201ENST00000391057 LOC100509620A0A075B734 347 aa2.87□□□□□ -1.95
RNU6-550P-201ENST00000391057 MED19A0JLT2 244 aaPredicted RBP2.87□□□□□ -1.95
RNU6-550P-201ENST00000391057 PMS2P5A8MQ11 134 aa2.87□□□□□ -1.95
RNU6-550P-201ENST00000391057 ERVV-2B6SEH9 535 aa2.87□□□□□ -1.95
RNU6-550P-201ENST00000391057 CLIC2O15247 247 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms