RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ZNF624Q9P2J8 865 aaPredicted RBP5.43□□□□□ -1.54
SNORA40.4-201ENST00000390971 AMACRQ9UHK6 382 aa5.43□□□□□ -1.54
SNORA40.4-201ENST00000390971 PCDHGA5Q9Y5G8 931 aa5.43□□□□□ -1.54
SNORA40.4-201ENST00000390971 A0A0G2JLW4 131 aa5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 EDIL3O43854 480 aa5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 GPR137BO60478 399 aa5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 DOK2O60496 412 aa5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 MITFO75030 526 aaPredicted RBP5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 GEMIN4P57678 1058 aaKnown RBP5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 TRPT1Q86TN4 253 aaKnown RBP5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 SAT2Q96F10 170 aaPredicted RBP5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 HRH4Q9H3N8 390 aa5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 SCRT2Q9NQ03 307 aa5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 ZNF644Q9H582 1327 aaPredicted RBP5.42□□□□□ -1.54
SNORA40.4-201ENST00000390971 TEX13DA0A0J9YY54 714 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 DUXAA6NLW8 204 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 SH3BP5O60239 455 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 SYNCRIPO60506 623 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 CIDEAO60543 219 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 RSL1D1O76021 490 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 H1F0P07305 194 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 GNAZP19086 355 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 NMBRP28336 390 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 MFAP4P55083 255 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 IRF3Q14653 427 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 TMEM30BQ3MIR4 351 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 ZC2HC1CQ53FD0 456 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 RAB41Q5JT25 222 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 KLC3Q6P597 504 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 RBMS3Q6XE24 437 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 FASTKD5Q7L8L6 764 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 GPALPP1Q8IXQ4 340 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 RPAP2Q8IXW5 612 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 WDSUB1Q8N9V3 476 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 LGALS12Q96DT0 336 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 RBM4Q9BWF3 364 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 MAK16Q9BXY0 300 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 BARHL1Q9BZE3 327 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 MIOSQ9NXC5 875 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 DDX43Q9NXZ2 648 aaKnown RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 PTTG2Q9NZH5 202 aa5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 ZNF215Q9UL58 517 aaPredicted RBP5.41□□□□□ -1.54
SNORA40.4-201ENST00000390971 A0A1W2PR77 199 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 CLIC2O15247 247 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 GCNT3O95395 438 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 PRLRP16471 622 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 CLNS1AP54105 237 aaKnown RBP5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 MFAP5Q13361 173 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 DLG2Q15700 870 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 KRTAP27-1Q3LI81 207 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 ZNF876PQ49A33 203 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 PLEKHS1Q5SXH7 462 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 GCNT6Q5T4J0 391 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 ADALQ6DHV7 355 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 L3MBTL4Q8NA19 623 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 TBC1D16Q8TBP0 767 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 FCAMRQ8WWV6 532 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 CHMP1AQ9HD42 196 aaPredicted RBP5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 ADPRHL2Q9NX46 363 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 SEC63Q9UGP8 760 aaKnown RBP5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 C2CD2Q9Y426 696 aa5.4□□□□□ -1.54
SNORA40.4-201ENST00000390971 WDR81Q562E7 1941 aa5.4□□□□□ -1.55
SNORA40.4-201ENST00000390971 A6NCN8 305 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 B4DLN1 442 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 TSHBP01222 138 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 IGHV4-38-2P0DP08 117 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 ERVK-10P10266 1014 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 CKMT2P17540 419 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 CHRNB4P30926 498 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 HOXC8P31273 242 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 NR0B1P51843 470 aaKnown RBP5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 MRPL12P52815 198 aaKnown RBP5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 ATP12AP54707 1039 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 PPIGQ13427 754 aaKnown RBP eCLIP5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 KRT33BQ14525 404 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 DUSP28Q4G0W2 176 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 ARHGAP17Q68EM7 881 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 DENND5BQ6ZUT9 1274 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 INTS8Q75QN2 995 aaKnown RBP5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 TRIM58Q8NG06 486 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 WBP2Q969T9 261 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 CEP295NLQ96MC4 621 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 PSD2Q9BQI7 771 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 MBNL1Q9NR56 388 aaKnown RBP5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 ECHDC1Q9NTX5 307 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 TBC1D22BQ9NU19 505 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 BLOC1S4Q9NUP1 217 aa5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 SUCLA2Q9P2R7 463 aaPredicted RBP5.39□□□□□ -1.55
SNORA40.4-201ENST00000390971 CGAP01215 116 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 PATE4P0C8F1 98 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 RNF224P0DH78 156 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 MMP9P14780 707 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 SUOXP51687 545 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 RPS18P62269 152 aaKnown RBP5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 MC1RQ01726 317 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 CREB5Q02930 508 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 ARHGAP11AQ6P4F7 1023 aa5.38□□□□□ -1.55
SNORA40.4-201ENST00000390971 PLD3Q8IV08 490 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms