RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 MAPK4P31152 587 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 VEGFCP49767 419 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 HSD17B4P51659 736 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 ARF3P61204 181 aaPredicted RBP3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 ARF1P84077 181 aaKnown RBP3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 FAM180BQ6P0A1 224 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 GPALPP1Q8IXQ4 340 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 SCYL3Q8IZE3 742 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 TAS1R2Q8TE23 839 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 BICC1Q9H694 974 aaKnown RBP3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 EIF2B3Q9NR50 452 aaKnown RBP3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 PAG1Q9NWQ8 432 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 C2orf42Q9NWW7 574 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 DNAJB4Q9UDY4 337 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 AMACRQ9UHK6 382 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 C2CD2Q9Y426 696 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 A0A1W2PR77 199 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 GPR137BO60478 399 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 SYNCRIPO60506 623 aaKnown RBP3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 PTP4A3O75365 173 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 GCNT3O95395 438 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 CLTBP09497 229 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 GNAZP19086 355 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 PAX3P23760 479 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 PSMB10P40306 273 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 RXRGP48443 463 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 ERVK11-1P61568 191 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 GNB1P62873 340 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 MRPS5P82675 430 aaKnown RBP3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 MFAP5Q13361 173 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 CCDC30Q5VVM6 783 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 CLEC17AQ6ZS10 378 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 C1orf122Q6ZSJ8 110 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 FASTKD5Q7L8L6 764 aaKnown RBP3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 TBC1D1Q86TI0 1168 aaPredicted RBP3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 CERS3Q8IU89 383 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 OR2T12Q8NG77 320 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 SEMA4DQ92854 862 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 LRRC59Q96AG4 307 aaKnown RBP3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 DDOQ99489 341 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 HGH1Q9BTY7 390 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 SLC52A3Q9NQ40 469 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 PNMA2Q9UL42 364 aa3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZNF644Q9H582 1327 aaPredicted RBP3.35□□□□□ -1.87
SNORA40.3-201ENST00000390964 CLIC2O15247 247 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 SERPINB2P05120 415 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 H1F0P07305 194 aaKnown RBP3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 LIFP15018 202 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 CAPN3P20807 821 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 GARSP41250 739 aaKnown RBP3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 KCNC3Q14003 757 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 FBXL22Q6P050 247 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 KLC3Q6P597 504 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 TTC39CQ8N584 583 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 L3MBTL4Q8NA19 623 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 SKA1Q96BD8 255 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 EVI5LQ96CN4 794 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 ASCL2Q99929 193 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 SRSF8Q9BRL6 282 aaKnown RBP3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 FSD1Q9BTV5 496 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 FTOQ9C0B1 505 aaKnown RBP eCLIP3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 SMARCAD1Q9H4L7 1026 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 DNAJC18Q9H819 358 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 MIOSQ9NXC5 875 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 LAS1LQ9Y4W2 734 aaKnown RBP3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 FLT1P17948 1338 aa3.34□□□□□ -1.87
SNORA40.3-201ENST00000390964 DUXAA6NLW8 204 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 HHLA1C9JL84 531 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 PTGES3LE9PB15 166 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 MITFO75030 526 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 ZBED4O75132 1171 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 CSPG5O95196 566 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 PRLRP16471 622 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 GNB3P16520 340 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 CKMT2P17540 419 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 NMBRP28336 390 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 ALDH4A1P30038 563 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 PPP2R2BQ00005 443 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 FCN2Q15485 313 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 KIAA1644Q3SXP7 199 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 GCNT6Q5T4J0 391 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 FAM53AQ6NSI3 398 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 C15orf39Q6ZRI6 1047 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 DENND5BQ6ZUT9 1274 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 PLD3Q8IV08 490 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 C1orf131Q8NDD1 294 aaKnown RBP3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 TBC1D16Q8TBP0 767 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 SLC47A1Q96FL8 570 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 SENP5Q96HI0 755 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 LRR1Q96L50 414 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 TREX2Q9BQ50 279 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 PSD2Q9BQI7 771 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 SLA2Q9H6Q3 261 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 MBNL1Q9NR56 388 aaKnown RBP3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 ECHDC1Q9NTX5 307 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 COQ3Q9NZJ6 369 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 PCDHGA5Q9Y5G8 931 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 ASTN2O75129 1339 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 SNED1Q8TER0 1413 aa3.33□□□□□ -1.88
SNORA40.3-201ENST00000390964 LRRC72A6NJI9 287 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms