RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 RAB33BQ9H082 229 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 EPHA6Q9UF33 1036 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 PISDQ9UG56 409 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 ACSL5Q9ULC5 683 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 NEU2Q9Y3R4 380 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 PCDHGA3Q9Y5H0 932 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 BOD1L1Q8NFC6 3051 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 TLN1Q9Y490 2541 aaKnown RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 HEATR9A2RTY3 570 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 B4E171 279 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 APRTP07741 180 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 ANKRD34CP0C6C1 535 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 JMJD7P0C870 316 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 RALBP11234 206 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 TPSB2P20231 275 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 MPSTP25325 297 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 MSNP26038 577 aaKnown RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 TSPAN7P41732 249 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 CDK16Q00536 496 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 CLN3Q13286 438 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 LAMB3Q13751 1172 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 SEPT6Q14141 434 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 GPR18Q14330 331 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 ITIH4Q14624 930 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 TPSAB1Q15661 275 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 SEPT7Q16181 437 aaKnown RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCDC38Q502W7 563 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 TTC27Q6P3X3 843 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 PACS1Q6VY07 963 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZNF534Q76KX8 674 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 NLRP9Q7RTR0 991 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 PDZD3Q86UT5 571 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 DTX1Q86Y01 620 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 SLC35F6Q8N357 371 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 LILRA3Q8N6C8 439 aaPredicted RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 DNAAF3Q8N9W5 541 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 AGBL5Q8NDL9 886 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 GPR150Q8NGU9 434 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 SNRNP27Q8WVK2 155 aaKnown RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZFPM2Q8WW38 1151 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 KCNE4Q8WWG9 221 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 NCSTNQ92542 709 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 USP7Q93009 1102 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 AHCYL2Q96HN2 611 aaKnown RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 INSM2Q96T92 566 aaPredicted RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 SPRY4Q9C004 299 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 SEMA5BQ9P283 1151 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 SLC2A6Q9UGQ3 507 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 TCAF1Q9Y4C2 921 aa11.15□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR51F1A6NGY5 319 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 E7EVH7 732 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 CES2O00748 559 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 TOX3O15405 576 aaPredicted RBP11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 ZSCAN12O43309 604 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 PRAMEF10O60809 474 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 UBXN7O94888 489 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 AP2A2O94973 939 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 GSTM1P09488 218 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 MTHFD1P11586 935 aaKnown RBP11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 HALP42357 657 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 NPY2RP49146 381 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 GSTM4Q03013 218 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 ZRANB3Q5FWF4 1079 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 PPP1R21Q6ZMI0 780 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 PLXDC1Q8IUK5 500 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 TRIM48Q8IWZ4 208 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 CLDN19Q8N6F1 224 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 HM13Q8TCT9 377 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 ACTRT1Q8TDG2 376 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 COG1Q8WTW3 980 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 HDAC10Q969S8 669 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 PMEPA1Q969W9 287 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 CXorf40BQ96DE9 158 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 DCUN1D1Q96GG9 259 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 NAF1Q96HR8 494 aaKnown RBP11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 C9orf72Q96LT7 481 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 RMDN2Q96LZ7 410 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 TAAR9Q96RI9 348 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 OSBPL9Q96SU4 736 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 CCM2Q9BSQ5 444 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 WWP1Q9H0M0 922 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 OR52A5Q9H2C5 316 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 TREX1Q9NSU2 369 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 OCIAD1Q9NX40 245 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 SIDT1Q9NXL6 827 aaKnown RBP11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 AKAP7Q9P0M2 348 aaPredicted RBP11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 PSMD13Q9UNM6 376 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 PRSS21Q9Y6M0 314 aa11.14□□□□□ -0.63
IGHV4-28-201ENST00000390612 TCRBV7S3A2A0A539 114 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 CCDC78A2IDD5 438 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 KLK10O43240 276 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 EFSO43281 561 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 GAS8O95995 478 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 GOT2P00505 430 aaKnown RBP11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 TYRP1P17643 537 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms