RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CLIP4Q8N3C7 705 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TRUB1Q8WWH5 349 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZNF347Q96SE7 839 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 SACM1LQ9NTJ5 587 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 INTS7Q9NVH2 962 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 CLN6Q9NWW5 311 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 GMPR2Q9P2T1 348 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 AGO1Q9UL18 857 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PRMT5O14744 637 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 BEST1O76090 585 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 CHRM5P08912 532 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 MAGEA6P43360 314 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 GTF2H2Q13888 395 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 GTF2H2CQ6P1K8 395 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 BORAQ6PGQ7 559 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PIWIL3Q7Z3Z3 882 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC34A3Q8N130 599 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TMEM174Q8WUU8 243 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TFAP2CQ92754 450 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TFB2MQ9H5Q4 396 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 MEAF6Q9HAF1 191 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 ABCB9Q9NP78 766 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 FAM105AQ9NUU6 356 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PPP2R3BQ9Y5P8 575 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TCRBV5S1A1TA0A578 114 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 J3KR12 359 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TREHO43280 583 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PDE9AO76083 593 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 FABP3P05413 133 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 G6PDP11413 515 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 MYL12AP19105 171 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 KIR3DL1P43629 444 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 QPRTQ15274 297 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PABPC1LQ4VXU2 614 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 C6orf141Q5SZD1 244 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 SULT1C3Q6IMI6 304 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 DLK2Q6UY11 383 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 RAB43Q86YS6 212 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 CHERPQ8IWX8 916 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 NPWQ8N729 165 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TINF2Q9BSI4 451 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 TALDO1P37837 337 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 MXD1Q05195 221 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 CNTN1Q12860 1018 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 TUBA3CQ13748 450 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 CILP2Q8IUL8 1156 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 WDR36Q8NI36 951 aaKnown RBP12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 CNIH3Q8TBE1 160 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 C17orf50Q8WW18 174 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 NPLQ9BXD5 320 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 CRISPLD1Q9H336 500 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 FKBPLQ9UIM3 349 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 SPATA2Q9UM82 520 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 BTBD19C9JJ37 291 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 CYP2A7P20853 494 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 WARSP23381 471 aaKnown RBP12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 NKX2-5P52952 324 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 TAZQ16635 292 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 MFSD14CQ5VZR4 134 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 DCDC5Q6ZRR9 648 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 PTCHD4Q6ZW05 846 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 MON1AQ86VX9 555 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 CYP4Z1Q86W10 505 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 NACC2Q96BF6 587 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 RNFT2Q96EX2 444 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 FUNDC2Q9BWH2 189 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 SPON1Q9HCB6 807 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 TESMINQ9Y4I5 508 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 DCLK1O15075 740 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 RHOQP17081 205 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 OXTRP30559 389 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 OR4D2P58180 307 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 ATP6AP1Q15904 470 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 DOK6Q6PKX4 331 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 OR7D4Q8NG98 312 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 VRTNQ9H8Y1 702 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 TRPM5Q9NZQ8 1165 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 DKK3Q9UBP4 350 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
TRAPPC9-201ENST00000389328 IQCF5A8MTL0 148 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 STBD1O95210 358 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC25A14O95258 325 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 C1RP00736 705 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 C8BP07358 591 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 CAPN3P20807 821 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 MAP2K4P45985 399 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 HCAR3P49019 387 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 AGTR2P50052 363 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 NUDT6P53370 316 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 PHC1P78364 1004 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 PFKPQ01813 784 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 BCL2L1Q07817 233 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC13A2Q13183 592 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 UNC50Q53HI1 259 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms