RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 SKA2Q8WVK7 121 aaPredicted RBP26.37■■□□□ 1.81
MSX1-201ENST00000382723 TEX101Q9BY14 249 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 CD320Q9NPF0 282 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 THAP1Q9NVV9 213 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 NCKIPSDQ9NZQ3 722 aa26.37■■□□□ 1.81
MSX1-201ENST00000382723 NCF1BA6NI72 391 aaPredicted RBP26.36■■□□□ 1.81
MSX1-201ENST00000382723 NCF1CA8MVU1 366 aaPredicted RBP26.36■■□□□ 1.81
MSX1-201ENST00000382723 KPNA5O15131 536 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 IPO13O94829 963 aaKnown RBP26.36■■□□□ 1.81
MSX1-201ENST00000382723 CBSLP0DN79 551 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 NCF1P14598 390 aaPredicted RBP26.36■■□□□ 1.81
MSX1-201ENST00000382723 CBSP35520 551 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 IGFALSP35858 605 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 OCRLQ01968 901 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 GLIPR1L2Q4G1C9 344 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 CRTC3Q6UUV7 619 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 GPSM1Q86YR5 675 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 VRK3Q8IV63 474 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 GJD3Q8N144 294 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 OR6Y1Q8NGX8 325 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 CCDC126Q96EE4 140 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 TPSD1Q9BZJ3 242 aa26.36■■□□□ 1.81
MSX1-201ENST00000382723 UTP6Q9NYH9 597 aaKnown RBP26.36■■□□□ 1.81
MSX1-201ENST00000382723 H2AFYO75367 372 aaKnown RBP26.35■■□□□ 1.81
MSX1-201ENST00000382723 SEMA4FO95754 770 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 MTHFD2P13995 350 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 GFAPP14136 432 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 PRKAA2P54646 552 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 ABCE1P61221 599 aaKnown RBP26.35■■□□□ 1.81
MSX1-201ENST00000382723 PFKFB4Q16877 469 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 BCL7AQ4VC05 210 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 SYTL3Q4VX76 610 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 PLEKHS1Q5SXH7 462 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 CYHR1Q6ZMK1 362 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 ASB2Q96Q27 587 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 EPHX3Q9H6B9 360 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 ADAMTS6Q9UKP5 1117 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 PRKAB1Q9Y478 270 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 SYCE1LA8MT33 242 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 ARRB2P32121 409 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 TRIM23P36406 574 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 ASPHQ12797 758 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 GKAP1Q5VSY0 366 aaPredicted RBP26.35■■□□□ 1.81
MSX1-201ENST00000382723 FRA10AC1Q70Z53 315 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 TRIM69Q86WT6 500 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 SLC22A9Q8IVM8 553 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 PTGR2Q8N8N7 351 aaPredicted RBP26.35■■□□□ 1.81
MSX1-201ENST00000382723 ASZ1Q8WWH4 475 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 C7orf26Q96N11 449 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 TMEM237Q96Q45 408 aa26.35■■□□□ 1.81
MSX1-201ENST00000382723 PHPT1Q9NRX4 125 aaPredicted RBP26.35■■□□□ 1.81
MSX1-201ENST00000382723 CCR10P46092 362 aa26.34■■□□□ 1.81
MSX1-201ENST00000382723 DNAJB13P59910 316 aa26.34■■□□□ 1.81
MSX1-201ENST00000382723 ATG14Q6ZNE5 492 aa26.34■■□□□ 1.81
MSX1-201ENST00000382723 PIGWQ7Z7B1 504 aa26.34■■□□□ 1.81
MSX1-201ENST00000382723 ADAMTSL2Q86TH1 951 aa26.34■■□□□ 1.81
MSX1-201ENST00000382723 LILRA3Q8N6C8 439 aaPredicted RBP26.34■■□□□ 1.81
MSX1-201ENST00000382723 TOE1Q96GM8 510 aaKnown RBP26.34■■□□□ 1.81
MSX1-201ENST00000382723 LILRB5O75023 590 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 ENO3P13929 434 aaPredicted RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 TEAD1P28347 426 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 PXNP49023 591 aaPredicted RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 GBX1Q14549 363 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 PLA2G4EQ3MJ16 856 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 CFAP157Q5JU67 520 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 SBSNQ6UWP8 590 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 SPATA21Q7Z572 469 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 ZNF547Q8IVP9 402 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 ZNF514Q96K75 400 aaPredicted RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 FAM126AQ9BYI3 521 aaPredicted RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 NPHS2Q9NP85 383 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 CDYLQ9Y232 598 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 PCYT1BQ9Y5K3 369 aaPredicted RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 SNX3O60493 162 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 HSPA4LO95757 839 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 DCNP07585 359 aaKnown RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 PREPP48147 710 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 HK3P52790 923 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 CLDN2P57739 230 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 CRLF3Q8IUI8 442 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 FBXO39Q8N4B4 442 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 FRMD1Q8N878 549 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 RLN3Q8WXF3 142 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 ASB12Q8WXK4 309 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 FOXJ1Q92949 421 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 TMEM159Q96B96 161 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 GRAMD1AQ96CP6 724 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 SEC16BQ96JE7 1060 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 CHRDQ9H2X0 955 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 C6orf106Q9H6K1 298 aaPredicted RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 CD274Q9NZQ7 290 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 MARCOQ9UEW3 520 aaPredicted RBP26.33■■□□□ 1.81
MSX1-201ENST00000382723 CA5BQ9Y2D0 317 aa26.33■■□□□ 1.81
MSX1-201ENST00000382723 PIKFYVEQ9Y2I7 2098 aa26.32■■□□□ 1.8
MSX1-201ENST00000382723 TMEM114B3SHH9 223 aa26.32■■□□□ 1.8
MSX1-201ENST00000382723 GPC4O75487 556 aa26.32■■□□□ 1.8
MSX1-201ENST00000382723 IGLV3-19P01714 112 aa26.32■■□□□ 1.8
MSX1-201ENST00000382723 KITP10721 976 aa26.32■■□□□ 1.8
MSX1-201ENST00000382723 TGFBIQ15582 683 aa26.32■■□□□ 1.8
MSX1-201ENST00000382723 FBXO48Q5FWF7 155 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms