RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 KIF1CO43896 1103 aaKnown RBP21.23■□□□□ 0.99
TRIM54-202ENST00000380075 CLCN2P51788 898 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 BLOC1S3Q6QNY0 202 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 GPR149Q86SP6 731 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 RETREG3Q86VR2 466 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 PAF1Q8N7H5 531 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 PDPRQ8NCN5 879 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 SMRP1Q8NCR6 262 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 FAM156AQ8NDB6 213 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 OR2AP1Q8NGE2 309 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 BHMTQ93088 406 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 PBXIP1Q96AQ6 731 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 TUBGCP5Q96RT8 1024 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 EFHD1Q9BUP0 239 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 BRINP2Q9C0B6 783 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 PIDD1Q9HB75 910 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 EIF2B4Q9UI10 523 aaKnown RBP21.23■□□□□ 0.99
TRIM54-202ENST00000380075 CD207Q9UJ71 328 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 ZNF225Q9UK10 706 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 RAB26Q9ULW5 256 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 TIMM22Q9Y584 194 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 AP4S1Q9Y587 144 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 A0A1B0GTL3 188 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 XYLBO75191 536 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 UBTFL6P0CB48 400 aaPredicted RBP21.23■□□□□ 0.99
TRIM54-202ENST00000380075 DGKAP23743 735 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 ACRV1P26436 265 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 SPAM1P38567 509 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 SLC7A2P52569 658 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 SNRPD1P62314 119 aaKnown RBP21.23■□□□□ 0.99
TRIM54-202ENST00000380075 ERVK-8P63133 956 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 EML3Q32P44 896 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 PDCD4Q53EL6 469 aaKnown RBP21.23■□□□□ 0.99
TRIM54-202ENST00000380075 GRASPQ7Z6J2 395 aaPredicted RBP21.23■□□□□ 0.99
TRIM54-202ENST00000380075 MYO1HQ8N1T3 1032 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 ISG20Q96AZ6 181 aaKnown RBP21.23■□□□□ 0.99
TRIM54-202ENST00000380075 TRIM15Q9C019 465 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 CIPCQ9C0C6 399 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 MAP10Q9P2G4 905 aa21.23■□□□□ 0.99
TRIM54-202ENST00000380075 GLYATL1P3A0A0U1RQE8 302 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 A0A0U1RQS6 177 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 IQCF5A8MTL0 148 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 DENRO43583 198 aaKnown RBP21.22■□□□□ 0.99
TRIM54-202ENST00000380075 CAPN3P20807 821 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 HNF1BP35680 557 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 NTHL1P78549 312 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 TFF2Q03403 129 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 SBSNQ6UWP8 590 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 LAYNQ6UX15 382 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 MACC1Q6ZN28 852 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 HS6ST3Q8IZP7 471 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 LILRA2Q8N149 483 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 SNX31Q8N9S9 440 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 GOLM1Q8NBJ4 401 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 OR6K2Q8NGY2 324 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 ZUFSPQ96AP4 578 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 PLEKHG4BQ96PX9 1271 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 PKP2Q99959 881 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 CORO1BQ9BR76 489 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 IL26Q9NPH9 171 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 ZIM2Q9NZV7 527 aa21.22■□□□□ 0.99
TRIM54-202ENST00000380075 RNASEH1O60930 286 aaKnown RBP21.21■□□□□ 0.99
TRIM54-202ENST00000380075 HSD17B1P14061 328 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 PRDX3P30048 256 aaKnown RBP21.21■□□□□ 0.99
TRIM54-202ENST00000380075 SLC7A1P30825 629 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 KCNK10P57789 538 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 FOLH1Q04609 750 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 RALGDSQ12967 914 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 BNIP2Q12982 314 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 RCAN2Q14206 197 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 VPS26BQ4G0F5 336 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 C6orf10Q5SRN2 563 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 CES5AQ6NT32 575 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 METTL2BQ6P1Q9 378 aaKnown RBP21.21■□□□□ 0.99
TRIM54-202ENST00000380075 DHFR2Q86XF0 187 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 TMEM102Q8N9M5 508 aaPredicted RBP21.21■□□□□ 0.99
TRIM54-202ENST00000380075 FAM126AQ9BYI3 521 aaPredicted RBP21.21■□□□□ 0.99
TRIM54-202ENST00000380075 PCDHAC1Q9H158 963 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 GIMAP2Q9UG22 337 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 OARD1Q9Y530 152 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 ZNF106Q9H2Y7 1883 aaKnown RBP21.21■□□□□ 0.99
TRIM54-202ENST00000380075 A0A1W2PP18 115 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 DYTNA2CJ06 578 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 H0YJX3 145 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 LEFTY2O00292 366 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 GPR39O43194 453 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 ZNF821O75541 412 aaPredicted RBP21.21■□□□□ 0.99
TRIM54-202ENST00000380075 POU2F2P09086 479 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 BPIP17213 487 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 PTPN2P17706 415 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 FAM219BQ5XKK7 198 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 TPGS1Q6ZTW0 290 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 MARVELD2Q8N4S9 558 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 TRIM54Q9BYV2 358 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 FAM192AQ9GZU8 254 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 SLC52A3Q9NQ40 469 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 KLHL42Q9P2K6 505 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 CRLS1Q9UJA2 301 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 PPIL1Q9Y3C6 166 aa21.21■□□□□ 0.99
TRIM54-202ENST00000380075 FFAR2O15552 330 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms