RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 PIWIL4Q7Z3Z4 852 aaKnown RBP11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 OR6K6Q8NGW6 343 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 ACMSDQ8TDX5 336 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 GPR20Q99678 358 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 MRM3Q9HC36 420 aaKnown RBP11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 MTMR10Q9NXD2 777 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 CNOT6Q9ULM6 557 aaKnown RBP11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 NPEPPSL1A6NEC2 478 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 C2orf71A6NGG8 1288 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 PEX11AO75192 247 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 CCNFP41002 786 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 MAPK10P53779 464 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 ECH1Q13011 328 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 RDH11Q8TC12 318 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 KCNJ9Q92806 393 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 HIPK3Q9H422 1215 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 FN3KQ9H479 309 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 IRAK1P51617 712 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 HERV-K104P61576 105 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 CCINQ13939 588 aa11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 TTYH1Q9H313 450 aaPredicted RBP11.12□□□□□ -0.63
PTCHD1-201ENST00000379361 IFNW1P05000 195 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 NCK1P16333 377 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 CFL1P23528 166 aaKnown RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 RBM34P42696 430 aaKnown RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 CRHR2Q13324 411 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 LRRC32Q14392 662 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 TMEM44Q2T9K0 475 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 MED27Q6P2C8 311 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 CPNE9Q8IYJ1 553 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 DEFB106AQ8N104 65 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 DIRAS2Q96HU8 199 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 HSFY1Q96LI6 401 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 ABCD2Q9UBJ2 740 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SIGLEC16A6NMB1 481 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF143P52747 638 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 PKNOX1P55347 436 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 C1QTNF8P60827 252 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 FOXO4P98177 505 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 PAMR1Q6UXH9 720 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SLC34A3Q8N130 599 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 XAGE5Q8WWM1 108 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 WRAP53Q9BUR4 548 aaKnown RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 TAS2R7Q9NYW3 318 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SCDO00767 359 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 ARHGAP12Q8IWW6 846 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SPERTQ8NA61 448 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 POC1BQ8TC44 478 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 C19orf25Q9UFG5 118 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SEC24CP53992 1094 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 DPYSL3Q14195 570 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SPDYCQ5MJ68 293 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 MTFR2Q6P444 385 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 DPEP2Q9H4A9 486 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 MRPS30Q9NP92 439 aaKnown RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 C5orf60A6NFR6 353 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SEPT4O43236 478 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 IFNA21P01568 189 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 GBX2P52951 348 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 ENPP2Q13822 863 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 FAM35AQ86V20 835 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 VANGL1Q8TAA9 524 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 POLR3HQ9Y535 204 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 ARPC2O15144 300 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 FAM228BP0C875 321 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 CHERPQ8IWX8 916 aaKnown RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 FBXO6Q9NRD1 293 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 MAP4K5Q9Y4K4 846 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 CD47Q08722 323 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 DUSP4Q13115 394 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 CHST9Q7L1S5 443 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 TBC1D21Q8IYX1 336 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 TRUB2O95900 331 aaKnown RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SCNN1GP51170 649 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 BEX3Q00994 111 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SLC44A3Q8N4M1 653 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 OR10H4Q8NGA5 316 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 HM13Q8TCT9 377 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 HAPLN3Q96S86 360 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 PIH1D1Q9NWS0 290 aaKnown RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 RCOR3Q9P2K3 495 aaPredicted RBP11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 IFNA2P01563 188 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 LINC00032P0C843 101 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 GNPDA1P46926 289 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 SLC8B1Q6J4K2 584 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 KCNQ5Q9NR82 932 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 MAU2Q9Y6X3 613 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 ZER1Q7Z7L7 766 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 LNX2Q8N448 690 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 GPR151Q8TDV0 419 aa11.11□□□□□ -0.63
PTCHD1-201ENST00000379361 AP2A2O94973 939 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 FABP3P05413 133 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 UAP1L1Q3KQV9 507 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 TOP6BLQ8N6T0 577 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 PRPF19Q9UMS4 504 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 DNMT3AQ9Y6K1 912 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ALKQ9UM73 1620 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms