RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MUS81Q96NY9 551 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 LEUTXA8MZ59 168 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 TXNL1O43396 289 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 CDH5P33151 784 aaPredicted RBP11.65□□□□□ -0.55
NPHP4-202ENST00000378161 CAP2P40123 477 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 INTS11Q5TA45 600 aaKnown RBP11.65□□□□□ -0.55
NPHP4-202ENST00000378161 IER5Q5VY09 327 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 CLRN3Q8NCR9 226 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 TRPM4Q8TD43 1214 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.55
NPHP4-202ENST00000378161 BBS4Q96RK4 519 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 TINAGL1Q9GZM7 467 aaPredicted RBP11.65□□□□□ -0.55
NPHP4-202ENST00000378161 ARHGEF4Q9NR80 690 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 PHF11Q9UIL8 331 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 CLCA2Q9UQC9 943 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 SLC9A8Q9Y2E8 581 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 MYH1P12882 1939 aa11.65□□□□□ -0.55
NPHP4-202ENST00000378161 E5RJQ4 531 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ADAMTS3O15072 1205 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 PI15O43692 258 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 PGRP06401 933 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ZNF37AP17032 561 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 TAL1P17542 331 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 JAM2P57087 298 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 GTF2BQ00403 316 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 MVKQ03426 396 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 FGL1Q08830 312 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 RFX4Q33E94 735 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 YIF1BQ5BJH7 314 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 RETREG3Q86VR2 466 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 DPP10Q8N608 796 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 DIRAS2Q96HU8 199 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 C10orf90Q96M02 699 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 TISP43B9A030 160 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 PLOD2O00469 737 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 SLC22A2O15244 555 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 S100A8P05109 93 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ARCN1P48444 511 aaKnown RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 POU4F1Q01851 419 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 GHRHRQ02643 423 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 DSC1Q08554 894 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 TCEAL6Q6IPX3 200 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 SPESP1Q6UW49 350 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 C10orf107Q8IVU9 208 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 VWA5B2Q8N398 1253 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 FBXL18Q96ME1 805 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 PDCD2LQ9BRP1 358 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 NT5C1AQ9BXI3 368 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 RC3H2Q9HBD1 1191 aaKnown RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 MTF2Q9Y483 593 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 AQP12BA6NM10 295 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 H0YAE9 185 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 CD6P30203 668 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 RAB13P51153 203 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 RAPSNQ13702 412 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 PCBP1Q15365 356 aaKnown RBP eCLIP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 SYT16Q17RD7 645 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 AQP12AQ8IXF9 295 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 BPIFB1Q8TDL5 484 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ZNF384Q8TF68 577 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 TCTEX1D2Q8WW35 142 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 EXOSC8Q96B26 276 aaKnown RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 FAM49AQ9H0Q0 323 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ACOXLQ9NUZ1 547 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ZNF624Q9P2J8 865 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ZNF112Q9UJU3 913 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 CACNG2Q9Y698 323 aa11.64□□□□□ -0.55
NPHP4-202ENST00000378161 ATG13O75143 517 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 GRAP2O75791 330 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 SEC14L2O76054 403 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 POLBP06746 335 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 S100A2P29034 98 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 HMGCS2P54868 508 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 HTRA4P83105 476 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 MACC1Q6ZN28 852 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 NRARPQ7Z6K4 114 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 MFSD2AQ8NA29 543 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 Q96MT0 163 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 FBXO8Q9NRD0 319 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 CISHQ9NSE2 258 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 EVA1BQ9NVM1 165 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ERVK13-1Q9NX77 482 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 GGA3Q9NZ52 723 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 POLR3HQ9Y535 204 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 A0A1W2PRQ8 180 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 KCNU1A8MYU2 1149 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 RFPL1O75677 317 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 PPM1BO75688 479 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 INMTO95050 263 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ATG7O95352 703 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 INHBBP09529 407 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 GJA1P17302 382 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 CTSKP43235 329 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 GTF2H3Q13889 308 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms