RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PHYKPLQ8IUZ5 450 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 LRTOMTQ8WZ04 291 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 RERGQ96A58 199 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 RPRD1BQ9NQG5 326 aaKnown RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 OXSMQ9NWU1 459 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 GALNT8Q9NY28 637 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ANGPT4Q9Y264 503 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ABHD14A-ACY1A0A1B0GW23 586 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 GSAPA4D1B5 854 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CCDC85CA6NKD9 419 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 OGNP20774 298 aaKnown RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 PSMD4P55036 377 aaKnown RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CLCQ05315 142 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 TRIM40Q6P9F5 258 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CDHR3Q6ZTQ4 885 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 VN1R5Q7Z5H4 357 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 KLHL23Q8NBE8 558 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ZNF540Q8NDQ6 660 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CLHC1Q8NHS4 586 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ESAMQ96AP7 390 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 SMOQ99835 787 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 TMEM175Q9BSA9 504 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ATG10Q9H0Y0 220 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CCSER2Q9H7U1 834 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ABCB8Q9NUT2 735 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CLN6Q9NWW5 311 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 NR2F1P10589 423 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 CCR4P51679 360 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 CSNK2BP67870 215 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 RGS1Q08116 209 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 LGALS3BPQ08380 585 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ZNF252P-AS1Q0IIN9 211 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 MOGSQ13724 837 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 TAF1AQ15573 450 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ANXA8L1Q5VT79 327 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 AKAP14Q86UN6 197 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 PHTF2Q8N3S3 785 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 KLHL32Q96NJ5 620 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 SPATA5L1Q9BVQ7 753 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 USP29Q9HBJ7 922 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 LRTM1Q9HBL6 345 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 SGK2Q9HBY8 427 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 NUDT4Q9NZJ9 180 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 VPS4AQ9UN37 437 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 CCDC162PA2VCL2 907 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 IFNA16P05015 189 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 HSPA7P48741 367 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ZNHIT3Q15649 155 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-201ENST00000378156 RAB6CQ53S08 254 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 TMEM130Q8N3G9 435 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 OR10G6Q8NH81 332 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 MOSPD2Q8NHP6 518 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 SH3RF2Q8TEC5 729 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 WRAP53Q9BUR4 548 aaKnown RBP14.85□□□□□ -0.03
NPHP4-201ENST00000378156 RAB6CQ9H0N0 254 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 OR51F1A6NGY5 319 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 PER2O15055 1255 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 NDUFB5O43674 189 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 RFPL1O75677 317 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 DBTP11182 482 aaKnown RBP14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-201ENST00000378156 SLC10A7Q0GE19 358 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 FRMD7Q6ZUT3 714 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ZNF671Q8TAW3 534 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 AP3S1Q92572 193 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 PPCDCQ96CD2 204 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 C8orf48Q96LL4 319 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 MIOSQ9NXC5 875 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ING3Q9NXR8 418 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 CD84Q9UIB8 345 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ERGIC3Q9Y282 383 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 FADS3Q9Y5Q0 445 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 LAMA4Q16363 1823 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 UBE2QL1A1L167 161 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 PIRO00625 290 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 NPHS1O60500 1241 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 TMCC2O75069 709 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 PPIBP23284 216 aaKnown RBP14.85□□□□□ -0.03
NPHP4-201ENST00000378156 GSTM5P46439 218 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 GPR17Q13304 367 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 CNKSR3Q6P9H4 555 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 TMPRSS11BQ86T26 416 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 CPNE9Q8IYJ1 553 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 AUTS2Q8WXX7 1259 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 ZNF599Q96NL3 588 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 AKAP7Q9P0M2 348 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-201ENST00000378156 INSL6Q9Y581 213 aa14.85□□□□□ -0.03
NPHP4-201ENST00000378156 GABRDO14764 452 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 RAB15P59190 212 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 OR14C36Q8NHC7 312 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 VMP1Q96GC9 406 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 NPY6RQ99463 290 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 RAB26Q9ULW5 256 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 ERVW-1Q9UQF0 538 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 WBP11Q9Y2W2 641 aaKnown RBP14.84□□□□□ -0.03
NPHP4-201ENST00000378156 ILVBLA1L0T0 632 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 MATN2O00339 956 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 PIP5K1BO14986 540 aa14.84□□□□□ -0.03
NPHP4-201ENST00000378156 TRMUO75648 421 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms