RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 EID3Q8N140 333 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 ZNF276Q8N554 614 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 ANKLE1Q8NAG6 615 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 PLEKHA8Q96JA3 519 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 C9orf16Q9BUW7 83 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 NUSAP1Q9BXS6 441 aaKnown RBP14.31□□□□□ -0.12
TCOF1-202ENST00000377797 MIR1-1HGQ9H1L0 117 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 MAGEE1Q9HCI5 957 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 ADPRHL2Q9NX46 363 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 CLOCKO15516 846 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 GUCY1B2O75343 617 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 POU1F1P28069 291 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 PRKAG1P54619 331 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 RAB30Q15771 203 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 CHST15Q7LFX5 561 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-202ENST00000377797 TMEM25Q86YD3 366 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 TXNDC5Q8NBS9 432 aaKnown RBP14.31□□□□□ -0.12
TCOF1-202ENST00000377797 KCNJ9Q92806 393 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 KIAA1191Q96A73 305 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 MAFFQ9ULX9 164 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 LOXHD1Q8IVV2 1947 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 HHLA1C9JL84 531 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 OR1I1O60431 355 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 S1PR4O95977 384 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 EIF2S1P05198 315 aaKnown RBP14.31□□□□□ -0.12
TCOF1-202ENST00000377797 ZNF37AP17032 561 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-202ENST00000377797 PRDX6P30041 224 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 CYP4F2P78329 520 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 C6orf89Q6UWU4 347 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 ZSCAN5AQ9BUG6 496 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 ENTPD4Q9Y227 616 aa14.31□□□□□ -0.12
TCOF1-202ENST00000377797 ZNF30P17039 623 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 TIE1P35590 1138 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 OCA2Q04671 838 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 CEP97Q8IW35 865 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 TRBV23OR9-2A0A075B6M9 112 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 DHRS12A0PJE2 317 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 NDUFS2O75306 463 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 SMNDC1O75940 238 aaKnown RBP eCLIP14.3□□□□□ -0.12
TCOF1-202ENST00000377797 SLC6A4P31645 630 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 HNF1BP35680 557 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 CCR10P46092 362 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 PNPLA1Q8N8W4 532 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 NAT14Q8WUY8 206 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 DERL2Q9GZP9 239 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 PSME2Q9UL46 239 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 NME7Q9Y5B8 376 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 SCAMP1O15126 338 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 GALNT13Q8IUC8 556 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 NXPE1Q8N323 547 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 NELL1Q92832 810 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 RAD51AP1Q96B01 352 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 NUS1Q96E22 293 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 SLC39A13Q96H72 371 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 ITCHQ96J02 903 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 RANBP9Q96S59 729 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 RNF38Q9H0F5 515 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 ELOVL2Q9NXB9 296 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 DYTNA2CJ06 578 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 CLPTM1O96005 669 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 FAM58BPP0C7Q3 252 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 RRM2P31350 389 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 KIR3DL1P43629 444 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 GPRC6AQ5T6X5 926 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 C11orf74Q86VG3 221 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 SCAMP4Q969E2 229 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 ZNF514Q96K75 400 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-202ENST00000377797 GAS2L1Q99501 681 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-202ENST00000377797 RHBGQ9H310 441 aa14.3□□□□□ -0.12
TCOF1-202ENST00000377797 NDRG2Q9UN36 371 aaKnown RBP14.3□□□□□ -0.12
TCOF1-202ENST00000377797 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 WASH4PA8MWX3 477 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 LEFTY1O75610 366 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 WFS1O76024 890 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 TRBC1P01850 177 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 AMD1P17707 334 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 EPORP19235 508 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 CD70P32970 193 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 KHDC1Q4VXA5 237 aaKnown RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 ISLR2Q6UXK2 745 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 SORCS1Q8WY21 1168 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 OSBPL6Q9BZF3 934 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 HCFC1R1Q9NWW0 138 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 EDDM13A0A1B0GTR0 161 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 GSNP06396 782 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 ATP1B2P14415 290 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 RPL3P39023 403 aaKnown RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 CREB5Q02930 508 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 GRM2Q14416 872 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 MBTPS1Q14703 1052 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 LHX8Q68G74 356 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 DHRSXQ8N5I4 330 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 OR10G6Q8NH81 332 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 COL26A1Q96A83 441 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 SKA1Q96BD8 255 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 ZNF641Q96N77 438 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 NLNQ9BYT8 704 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 CCDC177Q9NQR7 707 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms