RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ENTPD1P49961 510 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 DCTN2Q13561 401 aaKnown RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 BOP1Q14137 746 aaKnown RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 SLC14A2Q15849 920 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 MAPKAPK3Q16644 382 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 KCTD21Q4G0X4 260 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 SETMARQ53H47 684 aaPredicted RBP12.75□□□□□ -0.37
USP11-204ENST00000377107 TMTC4Q5T4D3 741 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 TXNDC8Q6A555 127 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 KCTD8Q6ZWB6 473 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 GOLGA7Q7Z5G4 137 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 TMEM126BQ8IUX1 230 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 MINDY1Q8N5J2 469 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 TOP1MTQ969P6 601 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 MUS81Q96NY9 551 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 RALGAPA2Q2PPJ7 1873 aa12.75□□□□□ -0.37
USP11-204ENST00000377107 AQP12BA6NM10 295 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 FFAR2O15552 330 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 HS6ST1O60243 411 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 CDK4P11802 303 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 CYP4B1P13584 511 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 IL7RP16871 459 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 RGS4P49798 205 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ADRM1Q16186 407 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ABRAXAS1Q6UWZ7 409 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 LRRC8DQ7L1W4 858 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 SPATA19Q7Z5L4 167 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 GALNT5Q7Z7M9 940 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 AQP12AQ8IXF9 295 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 TMEM199Q8N511 208 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 PROKR1Q8TCW9 393 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 C12orf43Q96C57 262 aaKnown RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 OPTCQ9UBM4 332 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ADGRE2Q9UHX3 823 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 CD84Q9UIB8 345 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 VPS4AQ9UN37 437 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 MIA3Q5JRA6 1907 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 TMEM88BA6NKF7 163 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 RAD51BO15315 384 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 AP1G1O43747 822 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 CAPN15O75808 1086 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 STC2O76061 302 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 EPOP01588 193 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 CSKP41240 450 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 LSM3P62310 102 aaKnown RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 TXNL4AP83876 142 aaKnown RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 CAP1Q01518 475 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 VAC14Q08AM6 782 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 BFSP2Q13515 415 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 PYCR3Q53H96 274 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 SPANXN4Q5MJ08 99 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ANGPTL8Q6UXH0 198 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 Q6ZSR9 355 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 HS6ST3Q8IZP7 471 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 PNPT1Q8TCS8 783 aaKnown RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 MGME1Q9BQP7 344 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ZNF490Q9ULM2 529 aaPredicted RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 A0A1B0GVM2 712 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 SMAD6O43541 496 aaKnown RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 KDELR3O43731 214 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 CST1P01037 141 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 BMP2P12643 396 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 RPL26P61254 145 aaKnown RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 PMS2P3Q13401 168 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 PHKG1Q16816 387 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 C11orf91Q3C1V1 193 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 FAM98BQ52LJ0 330 aaKnown RBP12.74□□□□□ -0.37
USP11-204ENST00000377107 ARTNQ5T4W7 220 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ANKS3Q6ZW76 656 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 GALNT10Q86SR1 603 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 PHYKPLQ8IUZ5 450 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 LIX1Q8N485 282 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 FAM86B1Q8N7N1 296 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ANKFN1Q8N957 763 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 OR2T12Q8NG77 320 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 TMBIM1Q969X1 311 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 ITCHQ96J02 903 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 MYRFLQ96LU7 910 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 AGPAT4Q9NRZ5 378 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 AASSQ9UDR5 926 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
USP11-204ENST00000377107 NYNRINQ9P2P1 1898 aaKnown RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 ASPDHA6ND91 283 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 VPS4BO75351 444 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 ULK1O75385 1050 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 B3GALT4O96024 378 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 RPS17P08708 135 aaKnown RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 ZNF7P17097 686 aaPredicted RBP12.73□□□□□ -0.37
USP11-204ENST00000377107 AKT1P31749 480 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 APOFQ13790 326 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 SPIDRQ14159 915 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 ENPP6Q6UWR7 440 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 KLHDC8BQ8IXV7 354 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 DTWD1Q8N5C7 304 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 FAM81AQ8TBF8 368 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 NCSTNQ92542 709 aa12.73□□□□□ -0.37
USP11-204ENST00000377107 SEPT8Q92599 483 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms