RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 HACD1B0YJ81 288 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 CST8O60676 142 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 ZBTB11O95625 1053 aaPredicted RBP22.68■■□□□ 1.22
C9orf47-202ENST00000375850 MSH3P20585 1137 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 PTPN4P29074 926 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 CTSCP53634 463 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 XRCC4Q13426 336 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 TMTC4Q5T4D3 741 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 ARMC6Q6NXE6 501 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 PID1Q7Z2X4 250 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 BLOC1S5Q8TDH9 187 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 MRGPRX2Q96LB1 330 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 MAP3K3Q99759 626 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 NHEJ1Q9H9Q4 299 aaPredicted RBP22.68■■□□□ 1.22
C9orf47-202ENST00000375850 LATS2Q9NRM7 1088 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 ABHD10Q9NUJ1 306 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 IMP3Q9NV31 184 aaKnown RBP22.68■■□□□ 1.22
C9orf47-202ENST00000375850 HRASLS2Q9NWW9 162 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 DOPEY2Q9Y3R5 2298 aa22.68■■□□□ 1.22
C9orf47-202ENST00000375850 ZNF106Q9H2Y7 1883 aaKnown RBP22.67■■□□□ 1.22
C9orf47-202ENST00000375850 MGAT4DA6NG13 374 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 OR2AG2A6NM03 316 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 UGT1A9O60656 530 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 TIAF1O95411 115 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 UGT1A6P19224 532 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 UGT1A1P22309 533 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 UGT1A4P22310 534 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 NFE2L1Q14494 772 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 TFDP3Q5H9I0 405 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 B4GALNT4Q76KP1 1039 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 SLC25A41Q8N5S1 370 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 LRFN5Q96NI6 719 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 FERMT1Q9BQL6 677 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 FSD1LQ9BXM9 530 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 UGT1A7Q9HAW7 530 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 UGT1A10Q9HAW8 530 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 UGT1A8Q9HAW9 530 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 PSMD13Q9UNM6 376 aa22.67■■□□□ 1.22
C9orf47-202ENST00000375850 PCDHGA9Q9Y5G4 932 aaKnown RBP22.67■■□□□ 1.22
C9orf47-202ENST00000375850 NBASA2RRP1 2371 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 MATN2O00339 956 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 STX7O15400 261 aaKnown RBP22.66■■□□□ 1.22
C9orf47-202ENST00000375850 EBLN1P0CF75 366 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 COMTP21964 271 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 NDUFS1P28331 727 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 AKT1P31749 480 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 GSDMDP57764 484 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 PPP1CAP62136 330 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 FAM182AQ5T1J6 154 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 SPOCD1Q6ZMY3 1216 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 FAM83HQ6ZRV2 1179 aaPredicted RBP22.66■■□□□ 1.22
C9orf47-202ENST00000375850 ZNF567Q8N184 647 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 IPMKQ8NFU5 416 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 OR2L2Q8NH16 312 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 ZNF398Q8TD17 642 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 KIR3DX1Q9H7L2 352 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 SYTL2Q9HCH5 934 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 KCND1Q9NSA2 647 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 SPTLC3Q9NUV7 552 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 SAE1Q9UBE0 346 aaPredicted RBP22.66■■□□□ 1.22
C9orf47-202ENST00000375850 HEBP2Q9Y5Z4 205 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 COLEC10Q9Y6Z7 277 aa22.66■■□□□ 1.22
C9orf47-202ENST00000375850 C2orf81A6NN90 581 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 K7EM74 188 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 SCRG1O75711 98 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 KLK3P07288 261 aaPredicted RBP22.65■■□□□ 1.22
C9orf47-202ENST00000375850 SLC35G4P0C7Q5 338 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 TNNT1P13805 278 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 PECAM1P16284 738 aaPredicted RBP22.65■■□□□ 1.22
C9orf47-202ENST00000375850 NR1D1P20393 614 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 CHRNA4P43681 627 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 HADHBP55084 474 aaKnown RBP22.65■■□□□ 1.22
C9orf47-202ENST00000375850 KCNAB1Q14722 419 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 NOMO1Q15155 1222 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 FNBP1LQ5T0N5 605 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 ZNF517Q6ZMY9 492 aaPredicted RBP22.65■■□□□ 1.22
C9orf47-202ENST00000375850 TMEM135Q86UB9 458 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 TMEM126BQ8IUX1 230 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 EFCAB3Q8N7B9 438 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 OXNAD1Q96HP4 312 aaPredicted RBP22.65■■□□□ 1.22
C9orf47-202ENST00000375850 LINC00615Q96LM1 132 aaPredicted RBP22.65■■□□□ 1.22
C9orf47-202ENST00000375850 C12orf66Q96MD2 445 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 CHP1Q99653 195 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 C19orf43Q9BQ61 176 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 FANCEQ9HB96 536 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 FARSAQ9Y285 508 aaKnown RBP22.65■■□□□ 1.22
C9orf47-202ENST00000375850 BTRCQ9Y297 605 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 PCDHGB7Q9Y5F8 929 aa22.65■■□□□ 1.22
C9orf47-202ENST00000375850 GAPDHSO14556 408 aaPredicted RBP22.64■■□□□ 1.21
C9orf47-202ENST00000375850 VPS4BO75351 444 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 ANXA9O76027 345 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 ZRANB2O95218 330 aaKnown RBP eCLIP22.64■■□□□ 1.21
C9orf47-202ENST00000375850 PRAMEF1O95521 474 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 PGDP52209 483 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 PRKAA1Q13131 559 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 BCL7AQ4VC05 210 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 IZUMO3Q5VZ72 239 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 KAZNQ674X7 775 aa22.64■■□□□ 1.21
C9orf47-202ENST00000375850 ZC3H18Q86VM9 953 aaKnown RBP22.64■■□□□ 1.21
C9orf47-202ENST00000375850 RCOR2Q8IZ40 523 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms