RNA–Protein interactions for RNA: ENST00000375638.7

C6orf48-203, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-203ENST00000375638 CTAGE4Q8IX94 777 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.11■□□□□ 0.337e-9■■□□□ 13.4
C6orf48-203ENST00000375638 GPR150Q8NGU9 434 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 SH3KBP1Q96B97 665 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 LRRC39Q96DD0 335 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 TCF12Q99081 682 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 SLC38A3Q99624 504 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 SYNDIG1Q9H7V2 258 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 C20orf96Q9NUD7 363 aaPredicted RBP17.11■□□□□ 0.33
C6orf48-203ENST00000375638 KLK13Q9UKR3 277 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 PSMD13Q9UNM6 376 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 CLCA2Q9UQC9 943 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 WDR37Q9Y2I8 494 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 NEUROG3Q9Y4Z2 214 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 FAM169AQ9Y6X4 670 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 KNTC1P50748 2209 aa17.11■□□□□ 0.33
C6orf48-203ENST00000375638 OR52A4PA6NMU1 304 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 PRMT5O14744 637 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-203ENST00000375638 TCEA3O75764 348 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 VIPP01282 170 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 SLC35G4P0C7Q5 338 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 ALDH4A1P30038 563 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 OR1D5P58170 312 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
C6orf48-203ENST00000375638 CCL7P80098 99 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 NR1D2Q14995 579 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 CLCA4Q14CN2 919 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 HP1BP3Q5SSJ5 553 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-203ENST00000375638 RNF187Q5TA31 235 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-203ENST00000375638 CDCP2Q5VXM1 449 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 ZNF449Q6P9G9 518 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 IGDCC3Q8IVU1 814 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 CXorf40BQ96DE9 158 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 GFM1Q96RP9 751 aaKnown RBP17.1■□□□□ 0.33
C6orf48-203ENST00000375638 LRRC1Q9BTT6 524 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 LRRN3Q9H3W5 708 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 IL1RAPL1Q9NZN1 696 aa17.1■□□□□ 0.33
C6orf48-203ENST00000375638 ZNF624Q9P2J8 865 aaPredicted RBP17.1■□□□□ 0.33
C6orf48-203ENST00000375638 ZC3H7BQ9UGR2 993 aaKnown RBP17.1■□□□□ 0.33
C6orf48-203ENST00000375638 RP1P56715 2156 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 FAM149AA5PLN7 773 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 FAM221BA6H8Z2 402 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 B4GAT1O43505 415 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 OGNP20774 298 aaKnown RBP17.09■□□□□ 0.33
C6orf48-203ENST00000375638 SLC19A1P41440 591 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 ELK3P41970 407 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 CAV1Q03135 178 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 TARDBPQ13148 414 aaKnown RBP eCLIP17.09■□□□□ 0.33
C6orf48-203ENST00000375638 SPIDRQ14159 915 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 CRYMQ14894 314 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 RPE65Q16518 533 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 TYSND1Q2T9J0 566 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 SPANXN3Q5MJ09 141 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 ZNF470Q6ECI4 717 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 PTRHD1Q6GMV3 140 aaKnown RBP17.09■□□□□ 0.33
C6orf48-203ENST00000375638 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
C6orf48-203ENST00000375638 LRRC6Q86X45 466 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 CILP2Q8IUL8 1156 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 LMNTD2Q8IXW0 634 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 CACTIN-AS1Q8N1I8 211 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 MMGT1Q8N4V1 131 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 LILRA3Q8N6C8 439 aaPredicted RBP17.09■□□□□ 0.33
C6orf48-203ENST00000375638 DCBLD1Q8N8Z6 715 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 CALML6Q8TD86 181 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 ELMO1Q92556 727 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 TSSK1BQ9BXA7 367 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.09■□□□□ 0.33
C6orf48-203ENST00000375638 WWP1Q9H0M0 922 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 COG4Q9H9E3 785 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 POT1Q9NUX5 634 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 KCNK4Q9NYG8 393 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 GRHL1Q9NZI5 618 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 CHMP2BQ9UQN3 213 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 VPS9D1Q9Y2B5 631 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 MSRB2Q9Y3D2 182 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 TEX264Q9Y6I9 313 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 CEP295Q9C0D2 2601 aa17.09■□□□□ 0.33
C6orf48-203ENST00000375638 A0A1W2PQM1 296 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 UBA6A0AVT1 1052 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 NTN3O00634 580 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 CASC3O15234 703 aaKnown RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 PLTPP55058 493 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 SLC7A5Q01650 507 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 PDIA2Q13087 525 aaKnown RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 RPA4Q13156 261 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 AMZ1Q400G9 498 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 ZNF658BQ4V348 819 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 HSP90AA5PQ58FG0 334 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 XKR5Q6UX68 686 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 CCNI2Q6ZMN8 369 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 CENPUQ71F23 418 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 ZNF761Q86XN6 746 aaPredicted RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 MARCH9Q86YJ5 346 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 RBM12BQ8IXT5 1001 aaKnown RBP17.08■□□□□ 0.32
C6orf48-203ENST00000375638 CEP112Q8N8E3 955 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 CFAP36Q96G28 342 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 FAM167BQ9BTA0 163 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 CARD6Q9BX69 1037 aa17.08■□□□□ 0.32
C6orf48-203ENST00000375638 P2RY12Q9H244 342 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms