RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 LYNP07948 512 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 ZCCHC18P0CG32 403 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SERPINA4P29622 427 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 HNF1BP35680 557 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SLC7A2P52569 658 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 LMAN2Q12907 356 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 TRAP1Q12931 704 aaKnown RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 NFATC2Q13469 925 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CCDC149Q6ZUS6 474 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SPATA19Q7Z5L4 167 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SNX20Q7Z614 316 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 ADAMTSL2Q86TH1 951 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 PHYKPLQ8IUZ5 450 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CPXM2Q8N436 756 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CATSPER1Q8NEC5 780 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 FIBINQ8TAL6 211 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 RPL10LQ96L21 214 aaKnown RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 KLHL32Q96NJ5 620 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 IL26Q9NPH9 171 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SDR39U1Q9NRG7 319 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 TMEM181Q9P2C4 612 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 GNPTGQ9UJJ9 305 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CLEC4EQ9ULY5 219 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 E2F3O00716 465 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 HTRA2O43464 458 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 BNIP3LO60238 219 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 TRIM16O95361 564 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 HNRNPA1P09651 372 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CEBPBP17676 345 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 ITGB6P18564 788 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CD70P32970 193 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CSNK1DP48730 415 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 RGS4P49798 205 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SLC7A9P82251 487 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 PLEKHG6Q3KR16 790 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SCIMPQ6UWF3 145 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 APLFQ8IW19 511 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CDYL2Q8N8U2 506 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 RIN3Q8TB24 985 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 NAT14Q8WUY8 206 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 PDLIM5Q96HC4 596 aaKnown RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 ZSWIM3Q96MP5 696 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 BTBD9Q96Q07 612 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 ACOX2Q99424 681 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 HOPXQ9BPY8 73 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 ABCB8Q9NUT2 735 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CRLS1Q9UJA2 301 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 TNPO3Q9Y5L0 923 aaKnown RBP11.92□□□□□ -0.5
HMGCL-202ENST00000374487 GLYATL1P3A0A0U1RQE8 302 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 C9JVG2 144 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 MOSPD3O75425 235 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 OR4F21O95013 312 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 PAPLNO95428 1278 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 MATN4O95460 622 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 UGT1A6P19224 532 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 UGT1A1P22309 533 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 UGT1A4P22310 534 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 FSHRP23945 695 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 UGT1A3P35503 534 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 UGT1A5P35504 534 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 DIO3P55073 304 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-202ENST00000374487 FOLH1Q04609 750 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 LYPLAL1Q5VWZ2 237 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 MYO1HQ8N1T3 1032 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 CLDN19Q8N6F1 224 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 DCBLD1Q8N8Z6 715 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 OR2AP1Q8NGE2 309 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ATP6V1E2Q96A05 226 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 DCUN1D1Q96GG9 259 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 CCT7Q99832 543 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 PKP2Q99959 881 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 BOCQ9BWV1 1114 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 LRRC3Q9BY71 257 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 Q9H521 79 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 NOL11Q9H8H0 719 aaKnown RBP11.91□□□□□ -0.5
HMGCL-202ENST00000374487 RIC8BQ9NVN3 520 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 GID8Q9NWU2 228 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 CD300AQ9UGN4 299 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 DPP7Q9UHL4 492 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 RIMS3Q9UJD0 308 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 AP4S1Q9Y587 144 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ANKRD36A6QL64 1941 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 PRSS51A0A1B0GVH4 220 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 LEFTY2O00292 366 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 RAD51BO15315 384 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 RNASEH1O60930 286 aaKnown RBP11.91□□□□□ -0.5
HMGCL-202ENST00000374487 SLC25A14O95258 325 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-202ENST00000374487 LINGO3P0C6S8 592 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 KCNK10P57789 538 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 SNRPD1P62314 119 aaKnown RBP11.91□□□□□ -0.5
HMGCL-202ENST00000374487 RHDQ02161 417 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 DGKKQ5KSL6 1271 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 IL23RQ5VWK5 629 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 GRAMD4Q6IC98 578 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms