RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SLC35G4P0C7Q5 338 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 ARSDP51689 593 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 CTSCP53634 463 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 FOXM1Q08050 763 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 PLCL1Q15111 1095 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 RPE65Q16518 533 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 CACHD1Q5VU97 1274 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 KLHL6Q8WZ60 621 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 SLC45A3Q96JT2 553 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 FCRL4Q96PJ5 515 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 SPRY4Q9C004 299 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 ADNPQ9H2P0 1102 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 PDE7BQ9NP56 450 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 SIDT1Q9NXL6 827 aaKnown RBP18.5■□□□□ 0.55
TMEM53-201ENST00000372235 FKBPLQ9UIM3 349 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 WDR37Q9Y2I8 494 aa18.5■□□□□ 0.55
TMEM53-201ENST00000372235 H7C0S8 307 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 QSOX1O00391 747 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 MTHFD1P11586 935 aaKnown RBP18.49■□□□□ 0.55
TMEM53-201ENST00000372235 ATP1B2P14415 290 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-201ENST00000372235 LIFP15018 202 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 GFERP55789 205 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 GSDMDP57764 484 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 KLF1Q13351 362 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-201ENST00000372235 NFE2L1Q14494 772 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 KRT33BQ14525 404 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 CRTC2Q53ET0 693 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-201ENST00000372235 SEL1L2Q5TEA6 688 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 ARMC6Q6NXE6 501 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 IRGCQ6NXR0 463 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 BORAQ6PGQ7 559 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 TMEM139Q8IV31 216 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 NXPE1Q8N323 547 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 JPH3Q8WXH2 748 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-201ENST00000372235 PMEPA1Q969W9 287 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 HES6Q96HZ4 224 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 CTRCQ99895 268 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 APOL2Q9BQE5 337 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 SLC12A9Q9BXP2 914 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 SEMA5BQ9P283 1151 aa18.49■□□□□ 0.55
TMEM53-201ENST00000372235 F8W8V4 182 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 MATN2O00339 956 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 CCNYL3P0C7X3 344 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 PRLHRP49683 370 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 ARL4DP49703 201 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 ZNF140P52738 457 aaPredicted RBP18.48■□□□□ 0.55
TMEM53-201ENST00000372235 XIAPP98170 497 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 ACY1Q03154 408 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 MSLNQ13421 630 aaPredicted RBP18.48■□□□□ 0.55
TMEM53-201ENST00000372235 GSE1Q14687 1217 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 LINC00303Q3SY05 128 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.48■□□□□ 0.55
TMEM53-201ENST00000372235 KCTD11Q693B1 232 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 OOSP2Q86WS3 158 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 PPP1R3BQ86XI6 285 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 RASGRP3Q8IV61 690 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 FAM71DQ8N9W8 422 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 HM13Q8TCT9 377 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 STYXQ8WUJ0 223 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 RSC1A1Q92681 617 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 EXTL1Q92935 676 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 FAM118BQ9BPY3 351 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 ULBP3Q9BZM4 244 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 FAM117AQ9C073 453 aa18.48■□□□□ 0.55
TMEM53-201ENST00000372235 IMP3Q9NV31 184 aaKnown RBP18.48■□□□□ 0.55
TMEM53-201ENST00000372235 HEMK1Q9Y5R4 338 aaPredicted RBP18.48■□□□□ 0.55
TMEM53-201ENST00000372235 AHCTF1Q8WYP5 2266 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 IFRD1O00458 451 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-201ENST00000372235 DDX3YO15523 660 aaKnown RBP18.47■□□□□ 0.55
TMEM53-201ENST00000372235 AP2A1O95782 977 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 DLGAP3O95886 979 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 FGF5P12034 268 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 PLA2G2AP14555 144 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 NELFEP18615 380 aaKnown RBP18.47■□□□□ 0.55
TMEM53-201ENST00000372235 PBLDP30039 288 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-201ENST00000372235 SEPHS1P49903 392 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 PRKAA1Q13131 559 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 SRSF6Q13247 344 aaKnown RBP18.47■□□□□ 0.55
TMEM53-201ENST00000372235 TBR1Q16650 682 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 SKIDA1Q1XH10 827 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 DENND5AQ6IQ26 1287 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 AADACL2Q6P093 401 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 C6orf15Q6UXA7 325 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-201ENST00000372235 DET1Q7L5Y6 550 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 SLC35B2Q8TB61 432 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 C12orf66Q96MD2 445 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 OR6C1Q96RD1 312 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 TTC1Q99614 292 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 KIR3DX1Q9H7L2 352 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 NLE1Q9NVX2 485 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-201ENST00000372235 ZDHHC3Q9NYG2 299 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 TUBD1Q9UJT1 453 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 PSMD13Q9UNM6 376 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 PCDHB3Q9Y5E6 796 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 SDK2Q58EX2 2172 aa18.47■□□□□ 0.55
TMEM53-201ENST00000372235 ZNF106Q9H2Y7 1883 aaKnown RBP18.46■□□□□ 0.55
TMEM53-201ENST00000372235 GOLGA6L3A6NEY3 463 aa18.46■□□□□ 0.55
TMEM53-201ENST00000372235 TLCD2A6NGC4 264 aa18.46■□□□□ 0.55
TMEM53-201ENST00000372235 GPR39O43194 453 aa18.46■□□□□ 0.55
TMEM53-201ENST00000372235 MAP3K7O43318 606 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms