RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 KCTD5Q9NXV2 234 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 DEC1Q9P2X7 70 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 ABHD14A-ACY1A0A1B0GW23 586 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 TTC34A8MYJ7 566 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 SNRPB2P08579 225 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 BMP7P18075 431 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 CYP3A5P20815 502 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 GPR15P49685 360 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 SULT2A1Q06520 285 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 AIMP2Q13155 320 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 WDR45BQ5MNZ6 344 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 DNAJC14Q6Y2X3 702 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 KYAT3Q6YP21 454 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 RP9Q8TA86 221 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 PANX3Q96QZ0 392 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 OR5B12Q96R08 314 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 TM6SF2Q9BZW4 377 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 A0A1W2PQH9 124 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 NUAK1O60285 661 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 PNPP00491 289 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 IFNA10P01566 189 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 IFNA4P05014 189 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 RBL1P28749 1068 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 RFC2P35250 354 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 VEGFBP49765 207 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 KCNMB4Q86W47 210 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 ANKRA2Q9H9E1 313 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 PRMT8Q9NR22 394 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 IGKV6D-41A0A0C4DH26 115 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 A0A1W2PQ45 241 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 A0A1W2PQY0 241 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 CRABP2P29373 138 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 TRIM23P36406 574 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 CDKN2CP42773 168 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 ALDH9A1P49189 494 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 ACTR3P61158 418 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 TAF10Q12962 218 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 NFE2L1Q14494 772 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 CCDC54Q8NEL0 328 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 TERB2Q8NHR7 220 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 SPATA5L1Q9BVQ7 753 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 PRDM16Q9HAZ2 1276 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 S100A14Q9HCY8 104 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 IFT46Q9NQC8 304 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 DUS2Q9NX74 493 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 IFT80Q9P2H3 777 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 ZNHIT2Q9UHR6 403 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 PSME2Q9UL46 239 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 SAMHD1Q9Y3Z3 626 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 PCDHGC5Q9Y5F6 944 aa13.91□□□□□ -0.18
RAPGEF1-202ENST00000372190 GRM6O15303 877 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 RPL14P50914 215 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 CREB5Q02930 508 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 ZNF549Q6P9A3 640 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 UBE2J2Q8N2K1 259 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 VAT1Q99536 393 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 OR2B2Q9GZK3 357 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TIMM8BQ9Y5J9 83 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 FAM149AA5PLN7 773 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 H0Y858 1186 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 DDX3YO15523 660 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 SGCEO43556 437 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 CD151P48509 253 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 MRPS5P82675 430 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 MBTD1Q05BQ5 628 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 PPP1R26Q5T8A7 1209 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 C12orf29Q8N999 325 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 GLIS3Q8NEA6 775 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 DNAJC19Q96DA6 116 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 KAT8Q9H7Z6 458 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 MAN2B2Q9Y2E5 1009 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3DA0A087WVF3 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3IA0A087WXS9 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3EA0A087X179 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3KA0A087X1G2 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3FA6NER0 549 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 SIGLEC16A6NMB1 481 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3LB9A6J9 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 SHBGP04278 402 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3HP0C7X1 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 LCN1P31025 176 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 MPPE1Q53F39 396 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3GQ6DHY5 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3CQ6IPX1 549 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 RNF44Q7L0R7 432 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 AMIGO1Q86WK6 493 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 CEP97Q8IW35 865 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 TBC1D3Q8IZP1 549 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 HSPA12BQ96MM6 686 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 C19orf12Q9NSK7 152 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 E9PAM4 449 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 OR1I1O60431 355 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 CALCAP01258 141 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 ARL2P36404 184 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 IL17AQ16552 155 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 MCOLN3Q8TDD5 553 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 CXorf40BQ96DE9 158 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 DNPEPQ9ULA0 475 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
RAPGEF1-202ENST00000372190 RPLP0P05388 317 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms