RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SUPT3HO75486 399 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 RPSAP08865 295 aaKnown RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 DRD1P21728 446 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 KCNC1P48547 511 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 SESN3P58005 492 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 IL2P60568 153 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 STX1BP61266 288 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 BCL2L1Q07817 233 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 LCP2Q13094 533 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 PEX6Q13608 980 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 PTK2BQ14289 1009 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 SETMARQ53H47 684 aaPredicted RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 KANK2Q63ZY3 851 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 ANKS6Q68DC2 871 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 PSAPL1Q6NUJ1 521 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 RYBPQ8N488 228 aaPredicted RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 CPA6Q8N4T0 437 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 GRIN3AQ8TCU5 1115 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 PIH1D2Q8WWB5 315 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 RCN3Q96D15 328 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 C19orf60Q96EN9 201 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 PDLIM5Q96HC4 596 aaKnown RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 MRPL1Q9BYD6 325 aaKnown RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 ATP13A3Q9H7F0 1226 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 ABCB8Q9NUT2 735 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 APPL1Q9UKG1 709 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 LRCH1Q9Y2L9 728 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 FCF1Q9Y324 198 aaKnown RBP13.9□□□□□ -0.18
LDB3-204ENST00000372066 PCDHB9Q9Y5E1 797 aa13.9□□□□□ -0.18
LDB3-204ENST00000372066 BBIP1A8MTZ0 92 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 E5RI56 91 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 PRMT5O14744 637 aaPredicted RBP13.89□□□□□ -0.19
LDB3-204ENST00000372066 AZIN1O14977 448 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 MLYCDO95822 493 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 ZNF806P0C7X5 589 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 GJA4P35212 333 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 XIAPP98170 497 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 FASTKQ14296 549 aaKnown RBP13.89□□□□□ -0.19
LDB3-204ENST00000372066 PFKFB4Q16877 469 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 FBXO43Q4G163 708 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 TMEM198Q66K66 360 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 NAIF1Q69YI7 327 aaPredicted RBP13.89□□□□□ -0.19
LDB3-204ENST00000372066 HACD2Q6Y1H2 254 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 LARP4Q71RC2 724 aaKnown RBP eCLIP13.89□□□□□ -0.19
LDB3-204ENST00000372066 CAMKK1Q8N5S9 505 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 CD200R1Q8TD46 325 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 DTX3LQ8TDB6 740 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 DLG3Q92796 817 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 N4BP2L2Q92802 583 aaPredicted RBP13.89□□□□□ -0.19
LDB3-204ENST00000372066 EXT2Q93063 718 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 ISG20Q96AZ6 181 aaKnown RBP13.89□□□□□ -0.19
LDB3-204ENST00000372066 TUBGCP5Q96RT8 1024 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 CCT7Q99832 543 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 SLC25A23Q9BV35 468 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 P2RY12Q9H244 342 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 NUDT4Q9NZJ9 180 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 CFAP97Q9P2B7 532 aa13.89□□□□□ -0.19
LDB3-204ENST00000372066 A0A0J9YYE9 177 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 A0A1W2PQ67 120 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 CAPN8A6NHC0 703 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 PSMD12O00232 456 aaPredicted RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 UBFD1O14562 309 aaKnown RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 PDE5AO76074 875 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 CDK14O94921 469 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 EPN2O95208 641 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 TRBC1P01850 177 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 ZNF7P17097 686 aaPredicted RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 ITGALP20701 1170 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 SERPINA4P29622 427 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 PSMD8P48556 350 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 MRPL19P49406 292 aaKnown RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 CCNIQ14094 377 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 CRY1Q16526 586 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 PLEKHG6Q3KR16 790 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 UGT3A2Q3SY77 523 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 PIGGQ5H8A4 983 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 CTSL3PQ5NE16 218 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 ZFP1Q6P2D0 407 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 PIANPQ8IYJ0 282 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 CBARPQ8N350 705 aaPredicted RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 WFDC5Q8TCV5 224 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 SH3RF2Q8TEC5 729 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 OSCP1Q8WVF1 389 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 NRG4Q8WWG1 115 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 HHIPQ96QV1 700 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 WDR41Q9HAD4 459 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 MID1IP1Q9NPA3 183 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 SARDHQ9UL12 918 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 G3BP2Q9UN86 482 aaKnown RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 FIS1Q9Y3D6 152 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 WNT6Q9Y6F9 365 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 CHEK2O96017 543 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 PRSS56P0CW18 603 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 EEF1DP29692 281 aaKnown RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 CLNS1AP54105 237 aaKnown RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 SNRPD1P62314 119 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms