RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SLC7A6OSQ96CW6 309 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 FCRL5Q96RD9 977 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 YIPF4Q9BSR8 244 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 NUAK2Q9H093 628 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 MYH7BA7E2Y1 1941 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 NUP214P35658 2090 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 SPAG17Q6Q759 2223 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 G3V2T6 193 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 H3BM21 787 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 TRAFD1O14545 582 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PTGESO14684 152 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 FGF3P11487 239 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 TCEA1P23193 301 aaKnown RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 KIR3DL1P43629 444 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 SLC11A1P49279 550 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 ST13P50502 369 aaKnown RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CSNK2BP67870 215 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 TNK2Q07912 1038 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 INCA1Q0VD86 236 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 GTF2H2Q13888 395 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 ACAP2Q15057 778 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PTPRRQ15256 657 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 C2orf27AQ580R0 203 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 RNASE12Q5GAN4 147 aaKnown RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 SNAP47Q5SQN1 464 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PPP1R15BQ5SWA1 713 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 ZNF648Q5T619 568 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 GTF2H2CQ6P1K8 395 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PSRC1Q6PGN9 363 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 MBOAT1Q6ZNC8 495 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 TRIM69Q86WT6 500 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 IFNL1Q8IU54 200 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CAMKK1Q8N5S9 505 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 SMG8Q8ND04 991 aaKnown RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 RDH11Q8TC12 318 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 MAPK15Q8TD08 544 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 NUP205Q92621 2012 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 SCAMP4Q969E2 229 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 ASB2Q96Q27 587 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 FAM83DQ9H4H8 585 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PDP1Q9P0J1 537 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 GSAPA4D1B5 854 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 ARVCFO00192 962 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PIRO00625 290 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 NADKO95544 446 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 TGFB1P01137 390 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 IL6P05231 212 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CYP2A6P11509 494 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 STK19P49842 368 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 SEC13P55735 322 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 GSCP56915 257 aaPredicted RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CHRNA6Q15825 494 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 MS4A13Q5J8X5 152 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 MBLAC2Q68D91 279 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 GPR153Q6NV75 609 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CYP20A1Q6UW02 462 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 B3GNT9Q6UX72 402 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 GALNT10Q86SR1 603 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 PRSS58Q8IYP2 241 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 GHDCQ8N2G8 530 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CXorf40AQ8TE69 158 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 DOK4Q8TEW6 326 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 SORCS1Q8WY21 1168 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 HTRA1Q92743 480 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 APOL4Q9BPW4 351 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CEP44Q9C0F1 390 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 UNC93B1Q9H1C4 597 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 DNAJC28Q9NX36 388 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 CNTN3Q9P232 1028 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 C3orf18Q9UK00 162 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 KLHL20Q9Y2M5 609 aa8.99□□□□□ -0.97
SMARCA1-202ENST00000371122 XYLBO75191 536 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 TCEA3O75764 348 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 ANXA4P09525 319 aaPredicted RBP8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 MANFP55145 182 aaKnown RBP8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 DEFA1P59665 94 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 DEFA3P59666 94 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 FAM189BP81408 668 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 MXD1Q05195 221 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 SLC18A2Q05940 514 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 C2orf80Q0P641 193 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 SLC9A5Q14940 896 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 NR1D2Q14995 579 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 PCBP1Q15365 356 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 TRIP4Q15650 581 aaPredicted RBP8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 TRNP1Q6NT89 227 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 TMEM220Q6QAJ8 160 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 CHST9Q7L1S5 443 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 CHMP1BQ7LBR1 199 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 ARMC8Q8IUR7 673 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 LRRC49Q8IUZ0 686 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 CLIP4Q8N3C7 705 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 GIPC3Q8TF64 312 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 KBTBD7Q8WVZ9 684 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 RNFT2Q96EX2 444 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 SLC47A1Q96FL8 570 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 SLC9A7Q96T83 725 aa8.98□□□□□ -0.97
SMARCA1-202ENST00000371122 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.98□□□□□ -0.977e-8■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms