RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 SLC47A1Q96FL8 570 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 PDLIM5Q96HC4 596 aaKnown RBP17.71■□□□□ 0.43
CHTOP-201ENST00000368686 CCDC115Q96NT0 180 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 TUBB1Q9H4B7 451 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 GORASP2Q9H8Y8 452 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 TMEFF2Q9UIK5 374 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-201ENST00000368686 SNTNA6NMZ2 147 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 LACTBL1A8MY62 500 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 DSCR3O14972 297 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 SLC4A1P02730 911 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 HOXD8P13378 290 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 NAGAP17050 411 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 DCTP40126 519 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 RPS5P46782 204 aaKnown RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 PPP3CCP48454 512 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 SULT1E1P49888 294 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 CLCN5P51795 746 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 CACTIN-AS1Q8N1I8 211 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 GIPC2Q8TF65 315 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 IPCEF1Q8WWN9 437 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 SLC39A13Q96H72 371 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 TEX37Q96LM6 180 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 WDR70Q9NW82 654 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 UBP1Q9NZI7 540 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 ERVW-1Q9UQF0 538 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 LYVE1Q9Y5Y7 322 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 A0A087WZ62 844 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 YDJCA8MPS7 323 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 MAFO75444 373 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 TSPAN9O75954 239 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 GOT2P00505 430 aaKnown RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 LINC00032P0C843 101 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 DDX5P17844 614 aaKnown RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 CTSKP43235 329 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 KEAP1Q14145 624 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 SLC25A52Q3SY17 297 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 CAPN13Q6MZZ7 669 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 FAM196AQ6ZSG2 479 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 NRARPQ7Z6K4 114 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 HIPK1Q86Z02 1210 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 TMEM192Q8IY95 271 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 RNF149Q8NC42 400 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 MARVELD3Q96A59 401 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 PYCR2Q96C36 320 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 AIFM2Q9BRQ8 373 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 ALG9Q9H6U8 611 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 ACTR8Q9H981 624 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 CARS2Q9HA77 564 aaKnown RBP17.7■□□□□ 0.42
CHTOP-201ENST00000368686 NRBP2Q9NSY0 501 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 CDH9Q9ULB4 789 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 RNF6Q9Y252 685 aa17.7■□□□□ 0.42
CHTOP-201ENST00000368686 PARP14Q460N5 1801 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 H3BQ06 376 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 FAM20BO75063 409 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 UGT2B17O75795 530 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 LCKP06239 509 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 MATKP42679 507 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 MAGEA11P43364 429 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 UGT2B15P54855 530 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 FOXA1P55317 472 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 HUNKP57058 714 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 LAPTM5Q13571 262 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 IER5Q5VY09 327 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 ENPP6Q6UWR7 440 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 DPP10Q8N608 796 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 FAM86B1Q8N7N1 296 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 NSUN6Q8TEA1 469 aaKnown RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 BRINP2Q9C0B6 783 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 RETREG1Q9H6L5 497 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 WDR6Q9NNW5 1121 aaKnown RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 TMEM45AQ9NWC5 275 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 NUP50Q9UKX7 468 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 TBC1D24Q9ULP9 559 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 PCDHGB2Q9Y5G2 931 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 PCM1Q15154 2024 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 FAM234BA2RU67 622 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 ZNF780AO75290 641 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 PRR35P0CG20 571 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 LAMTOR4Q0VGL1 99 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 ESCO2Q56NI9 601 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 EEF1DP3Q658K8 133 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 RAB44Q7Z6P3 723 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 ACOT1Q86TX2 421 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 CCDC117Q8IWD4 279 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 APPL2Q8NEU8 664 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 FBXO30Q8TB52 745 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 OMA1Q96E52 524 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 TEKT5Q96M29 485 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 CDT1Q9H211 546 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 C12orf4Q9NQ89 552 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 POLR3BQ9NW08 1133 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-201ENST00000368686 FBXO10Q9UK96 956 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 TRAPPC4Q9Y296 219 aa17.69■□□□□ 0.42
CHTOP-201ENST00000368686 MEIOCA2RUB1 952 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 CTDSP2O14595 271 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 SERPINF2P08697 491 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 LCP1P13796 627 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms