RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 HHEXQ03014 270 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 NR1D2Q14995 579 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 HIF1AQ16665 826 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 DNAJC21Q5F1R6 531 aaKnown RBP14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 AARS2Q5JTZ9 985 aaKnown RBP14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 AGAP9Q5VTM2 703 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 CDCP2Q5VXM1 449 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 METRNLQ641Q3 311 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 WASH2PQ6VEQ5 465 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 NAPRTQ6XQN6 538 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 CCNJLQ8IV13 435 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 CFAP206Q8IYR0 622 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 HM13Q8TCT9 377 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 LKAAEAR1Q8TD35 194 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 CCM2Q9BSQ5 444 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 ABCG4Q9H172 646 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 WASH6PQ9NQA3 447 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 WHRNQ9P202 907 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 KIR2DS5A0A0G2JLQ3 304 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 A0A0G2JNG1 304 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 KIR2DS3K7RE56 304 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 SMAPO00193 183 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 B4GAT1O43505 415 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 RPLP0P05388 317 aaKnown RBP14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 POLBP06746 335 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 PNLIPP16233 465 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 ITGB6P18564 788 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 PAMP19021 973 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 ELK3P41970 407 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 TTPAP49638 278 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 SHC2P98077 582 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 GUCY2DQ02846 1103 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 CRYMQ14894 314 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 KIR2DS5Q14953 304 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 FASTKD3Q14CZ7 662 aaKnown RBP14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 PDIK1LQ8N165 341 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 WWP1Q9H0M0 922 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 COG4Q9H9E3 785 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 SARS2Q9NP81 518 aaKnown RBP14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 CPNE7Q9UBL6 633 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 ANGPTL2Q9UKU9 493 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 ATXN7L1Q9ULK2 861 aaPredicted RBP14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 TEX264Q9Y6I9 313 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 FAM169AQ9Y6X4 670 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 OR5K4A6NMS3 321 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 IQCF5A8MTL0 148 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 NTN3O00634 580 aaPredicted RBP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 MT-CO3P00414 261 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC2A4P14672 509 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 H2AFXP16104 143 aaPredicted RBP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 ALDH4A1P30038 563 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 PDX1P52945 283 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 ARL4CP56559 192 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 BIRC2Q13490 618 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 TYSND1Q2T9J0 566 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZNF789Q5FWF6 425 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 NEPROQ6NW34 567 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 DUS1LQ6P1R4 473 aaKnown RBP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 CENPUQ71F23 418 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 TMPRSS12Q86WS5 348 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 ANKMY2Q8IV38 441 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 DENND6AQ8IWF6 608 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 GALNT15Q8N3T1 639 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 GPR150Q8NGU9 434 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 RMDN2Q96LZ7 410 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 TTC1Q99614 292 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 P2RY12Q9H244 342 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 LRRN3Q9H3W5 708 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 EPB41L5Q9HCM4 733 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 C20orf96Q9NUD7 363 aaPredicted RBP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 ARGLU1Q9NWB6 273 aaPredicted RBP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 CLCA2Q9UQC9 943 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 UTP11Q9Y3A2 253 aaKnown RBP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 NEUROG3Q9Y4Z2 214 aa14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 CFAP20Q9Y6A4 193 aaKnown RBP14.77□□□□□ -0.05
SMPDL3A-201ENST00000368440 C17orf113A0A1B0GUU1 675 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 UBA6A0AVT1 1052 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 NDUFS3O75489 264 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 OR56A5P0C7T3 313 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 JUPP14923 745 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 XRCC1P18887 633 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 PDHA2P29803 388 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 PREPP48147 710 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 CALCOCO2Q13137 446 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 TARDBPQ13148 414 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 RPE65Q16518 533 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 LONRF1Q17RB8 773 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 AMZ1Q400G9 498 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 NKAIN2Q5VXU1 208 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZNF470Q6ECI4 717 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 MRNIPQ6NTE8 343 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 TMPRSS9Q7Z410 1059 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC9B2Q86UD5 537 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 KRT222Q8N1A0 295 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 BBOF1Q8ND07 529 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 IFT81Q8WYA0 676 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 CFAP36Q96G28 342 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 INSM2Q96T92 566 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms