RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 DNASE1L3Q13609 305 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 LACTB2Q53H82 288 aaPredicted RBP13.23□□□□□ -0.29
PMF1-202ENST00000368277 TFDP3Q5H9I0 405 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 AADACL2Q6P093 401 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 PPP1R3BQ86XI6 285 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 SIDT2Q8NBJ9 832 aaKnown RBP13.23□□□□□ -0.29
PMF1-202ENST00000368277 APOBEC4Q8WW27 367 aaKnown RBP13.23□□□□□ -0.29
PMF1-202ENST00000368277 FSD1LQ9BXM9 530 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 TSPY26PQ9H489 355 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 FAM96AQ9H5X1 160 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 TUBD1Q9UJT1 453 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 PLAAQ9Y263 795 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 KCNMB2Q9Y691 235 aa13.23□□□□□ -0.29
PMF1-202ENST00000368277 MACROD2A1Z1Q3 448 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 STX7O15400 261 aaKnown RBP13.22□□□□□ -0.29
PMF1-202ENST00000368277 MTHFD1P11586 935 aaKnown RBP13.22□□□□□ -0.29
PMF1-202ENST00000368277 HLA-DPA1P20036 260 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 MSH3P20585 1137 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 PSMB4P28070 264 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 CASRP41180 1078 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 MC1RQ01726 317 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 DMPKQ09013 629 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 XRCC4Q13426 336 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 TCEAL1Q15170 157 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 GPR19Q15760 415 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 LDLRAP1Q5SW96 308 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 PRAMEF17Q5VTA0 474 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 CPZQ66K79 652 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 KATNAL2Q8IYT4 538 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 TC2NQ8N9U0 490 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 OR4K2Q8NGD2 314 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 OR13C4Q8NGS5 318 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 BRSK1Q8TDC3 778 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 ZDHHC12Q96GR4 267 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 C12orf66Q96MD2 445 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 ZCCHC2Q9C0B9 1178 aaKnown RBP13.22□□□□□ -0.29
PMF1-202ENST00000368277 TWSG1Q9GZX9 223 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 TRABDQ9H4I3 376 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 LHX9Q9NQ69 397 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 RARRES3Q9UL19 164 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 INTUQ9ULD6 942 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 PKP3Q9Y446 797 aa13.22□□□□□ -0.29
PMF1-202ENST00000368277 UTP20O75691 2785 aaKnown RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 RCCD1A6NED2 376 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 TOX3O15405 576 aaPredicted RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 MTSS1O43312 755 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 SGTAO43765 313 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 POLBP06746 335 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 PRSS56P0CW18 603 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 TNNT3P45378 269 aaPredicted RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 FOXK1P85037 733 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 OTUD4Q01804 1114 aaKnown RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 MPP3Q13368 585 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 SPARCL1Q14515 664 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 IL11RAQ14626 422 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 DNTTIP2Q5QJE6 756 aaKnown RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 FAM69BQ5VUD6 431 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 BZW1Q7L1Q6 419 aaKnown RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 CNGA4Q8IV77 575 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 RBM12BQ8IXT5 1001 aaKnown RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 ZNF398Q8TD17 642 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 SLC41A2Q96JW4 573 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 SRPK1Q96SB4 655 aaKnown RBP13.21□□□□□ -0.29
PMF1-202ENST00000368277 GBA3Q9H227 469 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 ACTL8Q9H568 366 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 ASB8Q9H765 288 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 HACD3Q9P035 362 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 EPHA6Q9UF33 1036 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 ANAPC2Q9UJX6 822 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 TLK1Q9UKI8 766 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
PMF1-202ENST00000368277 SEC16AO15027 2179 aa13.21□□□□□ -0.3
PMF1-202ENST00000368277 PIPSLA2A3N6 862 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 OR6C74A6NCV1 312 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 OR5K3A6NET4 321 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 GOLGA6L3A6NEY3 463 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 CREG1O75629 220 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.33e-7■■■■■ 30.9
PMF1-202ENST00000368277 LCA5LO95447 670 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 EPOP01588 193 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 CCNYL3P0C7X3 344 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 POLR2CP19387 275 aaPredicted RBP13.2□□□□□ -0.3
PMF1-202ENST00000368277 CDKN1CP49918 316 aaPredicted RBP13.2□□□□□ -0.3
PMF1-202ENST00000368277 KPNA2P52292 529 aaKnown RBP13.2□□□□□ -0.3
PMF1-202ENST00000368277 GEMP55040 296 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 MLLT10P55197 1068 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 SRSF1Q07955 248 aaKnown RBP eCLIP13.2□□□□□ -0.3
PMF1-202ENST00000368277 IL10RAQ13651 578 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 ITGA9Q13797 1035 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 SEPT6Q14141 434 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.2□□□□□ -0.3
PMF1-202ENST00000368277 METRNLQ641Q3 311 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 LCN10Q6JVE6 187 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 BBS12Q6ZW61 710 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 RCOR2Q8IZ40 523 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 ACTL9Q8TC94 416 aa13.2□□□□□ -0.3
PMF1-202ENST00000368277 ZNF514Q96K75 400 aaPredicted RBP13.2□□□□□ -0.3
PMF1-202ENST00000368277 RAB33BQ9H082 229 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms