RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 DHRSXQ8N5I4 330 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 TRUB1Q8WWH5 349 aaKnown RBP11.4□□□□□ -0.58
USF1-201ENST00000368019 ABTB1Q969K4 478 aaPredicted RBP11.4□□□□□ -0.58
USF1-201ENST00000368019 PPWD1Q96BP3 646 aaKnown RBP11.4□□□□□ -0.58
USF1-201ENST00000368019 C19orf60Q96EN9 201 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 OMDQ99983 421 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 BCL7BQ9BQE9 202 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 WDCPQ9H6R7 721 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 CATSPERBQ9H7T0 1116 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 CXorf21Q9HAI6 301 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 ATP13A1Q9HD20 1204 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SDR39U1Q9NRG7 319 aaPredicted RBP11.4□□□□□ -0.58
USF1-201ENST00000368019 TMPRSS4Q9NRS4 437 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SMOXQ9NWM0 555 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 C2orf42Q9NWW7 574 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 OSER1Q9NX31 292 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 GIN1Q9NXP7 522 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SMPD3Q9NY59 655 aaPredicted RBP11.4□□□□□ -0.58
USF1-201ENST00000368019 GMIPQ9P107 970 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SEPT3Q9UH03 358 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 GMEB2Q9UKD1 530 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 RIMKLBQ9ULI2 386 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 A0A0J9YYE9 177 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 A0A1B0GTW7 788 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 CHURC1-FNTBB4DL54 471 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 I6L893 689 aaPredicted RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 FXYD1O00168 92 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 PLOD2O00469 737 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 GIPC1O14908 333 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ANGPT2O15123 496 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ACOX3O15254 700 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 PRAMEF12O95522 483 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 FGF19O95750 216 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 HPRP00739 348 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 IGLV3-25P01717 112 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 HOXB6P17509 224 aaKnown RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 CKMT2P17540 419 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 TPH1P17752 444 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 LBPP18428 481 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ATF6P18850 670 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 GABRR2P28476 465 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 TPP2P29144 1249 aaPredicted RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 CNR2P34972 360 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 FNTBP49356 437 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 SCNN1BP51168 640 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 SUOXP51687 545 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 KPNA1P52294 538 aaPredicted RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 HERVK_113P63132 956 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ADARB1P78563 741 aaKnown RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 PLOD1Q02809 727 aaPredicted RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 RALGDSQ12967 914 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 CTBP1Q13363 440 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 EIF4EBP2Q13542 120 aaPredicted RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 CCINQ13939 588 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 LRRC32Q14392 662 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 CSHL1Q14406 222 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 LPAL2Q16609 132 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 UGT3A2Q3SY77 523 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 DGKKQ5KSL6 1271 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 GPR158Q5T848 1215 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 MANEALQ5VSG8 457 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 AFMIDQ63HM1 303 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ZNF470Q6ECI4 717 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ESRP1Q6NXG1 681 aaKnown RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 Q6ZS52 159 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 RAB44Q7Z6P3 723 aaPredicted RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 ITIH5Q86UX2 942 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 FAM35AQ86V20 835 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 LRRTM3Q86VH5 581 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 PROSER1Q86XN7 944 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 PHYKPLQ8IUZ5 450 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ARHGAP12Q8IWW6 846 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 HOMEZQ8IX15 550 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 YAF2Q8IY57 180 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 MIER2Q8N344 545 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ZNF786Q8N393 782 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 CBR4Q8N4T8 237 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 MINDY2Q8NBR6 621 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 DDHD1Q8NEL9 900 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 RHEBL1Q8TAI7 183 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 TBC1D15Q8TC07 691 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 CHPT1Q8WUD6 406 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 POP5Q969H6 163 aaKnown RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 THAP11Q96EK4 314 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 HSPBAP1Q96EW2 488 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 NRBF2Q96F24 287 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ZFYVE19Q96K21 471 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 LPIN3Q9BQK8 851 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 FICDQ9BVA6 458 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ERVK-6Q9BXR3 956 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 NUSAP1Q9BXS6 441 aaKnown RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 ATXN3LQ9H3M9 355 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 GPN2Q9H9Y4 310 aaPredicted RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 CSNK1G1Q9HCP0 422 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 PFDN4Q9NQP4 134 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 ANLNQ9NQW6 1124 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 DDIT4Q9NX09 232 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 OR12D3Q9UGF7 316 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms