RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 Q0VFX4 171 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 TLR1Q15399 786 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 ASIC2Q16515 512 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 ZNF569Q5MCW4 686 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 XKRXQ6PP77 449 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 ZNF677Q86XU0 584 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 CEP97Q8IW35 865 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 TMEM151BQ8IW70 566 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 MCEEQ96PE7 176 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 LYSMD1Q96S90 227 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 TRIM56Q9BRZ2 755 aaKnown RBP14.26□□□□□ -0.13
VAMP4-202ENST00000367740 CNPY3Q9BT09 278 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 VPS16Q9H269 839 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 ATP13A2Q9NQ11 1180 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 PTRH2Q9Y3E5 179 aaKnown RBP14.26□□□□□ -0.13
VAMP4-202ENST00000367740 FLNAP21333 2647 aaKnown RBP14.26□□□□□ -0.13
VAMP4-202ENST00000367740 C1orf232A0A0U1RR37 186 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 FAM221AA4D161 298 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 EIF3CLB5ME19 914 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 TMEM150CB9EJG8 249 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 MAFKO60675 156 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 ALOX12BO75342 701 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 SLC25A14O95258 325 aaPredicted RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 UNGP13051 313 aaPredicted RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 MMP13P45452 471 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 KPNA2P52292 529 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 AIMP2Q13155 320 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 RPUSD3Q6P087 351 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 GFRALQ6UXV0 394 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 C11orf96Q7Z7L8 435 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 CARFQ8N187 725 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 BBS5Q8N3I7 341 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 NR4A3Q92570 626 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 PEBP4Q96S96 227 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 EIF3CQ99613 913 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 SNRNP25Q9BV90 132 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 HRASLS2Q9NWW9 162 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 PKD2L2Q9NZM6 624 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 ADAM22Q9P0K1 906 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 HOOK1Q9UJC3 728 aaKnown RBP14.25□□□□□ -0.13
VAMP4-202ENST00000367740 SH3BGRL2Q9UJC5 107 aa14.25□□□□□ -0.13
VAMP4-202ENST00000367740 TMEM200CA6NKL6 621 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 BIN1O00499 593 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 VEGFDO43915 354 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 CNOT3O75175 753 aaKnown RBP14.24□□□□□ -0.13
VAMP4-202ENST00000367740 MTX2O75431 263 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 PRLP01236 227 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 HALP42357 657 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 OGDHQ02218 1023 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 ADCY2Q08462 1091 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 DPYSQ14117 519 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 PRKD1Q15139 912 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-202ENST00000367740 CYP2A13Q16696 494 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 KHDC1Q4VXA5 237 aaKnown RBP14.24□□□□□ -0.13
VAMP4-202ENST00000367740 PPP1R15BQ5SWA1 713 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 KLHDC7AQ5VTJ3 777 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 MLIPQ5VWP3 458 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 PLEKHA7Q6IQ23 1121 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 OOSP2Q86WS3 158 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 OR2Y1Q8NGV0 311 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 MTFMTQ96DP5 389 aaKnown RBP14.24□□□□□ -0.13
VAMP4-202ENST00000367740 TIGD1Q96MW7 591 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 TAAR6Q96RI8 345 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 SPOCK3Q9BQ16 436 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 TDRD1Q9BXT4 1180 aaKnown RBP14.24□□□□□ -0.13
VAMP4-202ENST00000367740 NT5MQ9NPB1 228 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 CHKBQ9Y259 395 aa14.24□□□□□ -0.13
VAMP4-202ENST00000367740 SLC9B1P1A6NJY1 282 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 AGPSO00116 658 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 UMODP07911 640 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 MSL3P1P0C860 447 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 UCHL3P15374 230 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 AGAP20933 346 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 AGXTP21549 392 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 MTIF2P46199 727 aaKnown RBP14.23□□□□□ -0.13
VAMP4-202ENST00000367740 NSFP46459 744 aaKnown RBP14.23□□□□□ -0.13
VAMP4-202ENST00000367740 RPE65Q16518 533 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 PPP6R3Q5H9R7 873 aaPredicted RBP14.23□□□□□ -0.13
VAMP4-202ENST00000367740 ZFYVE27Q5T4F4 411 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 MARC1Q5VT66 337 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 AGAP7PQ5VUJ5 663 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 PRAMEF13Q5VWM6 474 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 DNAJC24Q6P3W2 148 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 CYP4V2Q6ZWL3 525 aaPredicted RBP14.23□□□□□ -0.13
VAMP4-202ENST00000367740 B4GALNT4Q76KP1 1039 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 MON1BQ7L1V2 547 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 PHF13Q86YI8 300 aaPredicted RBP14.23□□□□□ -0.13
VAMP4-202ENST00000367740 ACBD4Q8NC06 268 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 LPCAT1Q8NF37 534 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 GLYATL1Q969I3 302 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 AGAP4Q96P64 663 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 PCDHB18PQ96TA0 734 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 SPATA16Q9BXB7 569 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 SLC7A5P2Q9GIP4 190 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 GSX1Q9H4S2 264 aaPredicted RBP14.23□□□□□ -0.13
VAMP4-202ENST00000367740 EPS8L2Q9H6S3 715 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 SLC6A20Q9NP91 592 aa14.23□□□□□ -0.13
VAMP4-202ENST00000367740 CWC15Q9P013 229 aaKnown RBP14.23□□□□□ -0.13
VAMP4-202ENST00000367740 PRRC2AP48634 2157 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms