RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 NTSP30990 170 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 STARP49675 285 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 NAT16Q8N8M0 369 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 HDAC2Q92769 488 aaKnown RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 POLE4Q9NR33 117 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ZIM2Q9NZV7 527 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 MYH2Q9UKX2 1941 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CAPN14A8MX76 684 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CHST10O43529 356 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 UGT2B17O75795 530 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PSKH1P11801 424 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 DNAJB13P59910 316 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 TAF1CQ15572 869 aaPredicted RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 CRY2Q49AN0 593 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 GALNT12Q8IXK2 581 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 QRFPRQ96P65 431 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ZNF607Q96SK3 696 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PRDM8Q9NQV8 689 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 TESMINQ9Y4I5 508 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 OR6C70A6NIJ9 312 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ACOX3O15254 700 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 AHSGP02765 367 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ALDOAP04075 364 aaKnown RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CTPS1P17812 591 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PTX3P26022 381 aaPredicted RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 CHRNA4P43681 627 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CEACAM7Q14002 265 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PARP15Q460N3 678 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PIGGQ5H8A4 983 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 TUBA3EQ6PEY2 450 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CYP2U1Q7Z449 544 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 SLC51AQ86UW1 340 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ZBTB2Q8N680 514 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMC5-201ENST00000361138 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 FUOMA2VDF0 154 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ARHGEF33A8MVX0 844 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 SORBS2O94875 1100 aaKnown RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 CCNB2O95067 398 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 LRG1P02750 347 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CATP04040 527 aaKnown RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 NDUFV1P49821 464 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 LAPTM5Q13571 262 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 GNA13Q14344 377 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PRR23BQ6ZRT6 265 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 UBE2R2Q712K3 238 aaPredicted RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ANKRD46Q86W74 232 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PPCDCQ96CD2 204 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 SLC39A8Q9C0K1 460 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CFL2Q9Y281 166 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 COL1A2P08123 1366 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PRAMEF33A0A0G2JMD5 474 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 GABRDO14764 452 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 PRAMEF10O60809 474 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 DNAJA1P31689 397 aaKnown RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 HSPA7P48741 367 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 SYT16Q17RD7 645 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 ZNF404Q494X3 552 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 FAM171A1Q5VUB5 890 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 SPPL2BQ8TCT7 592 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 UBE2E3Q969T4 207 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 TP53INP1Q96A56 240 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 HNRNPABQ99729 332 aaKnown RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 TMEM138Q9NPI0 162 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CCM2LQ9NUG4 571 aaPredicted RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 ERVK-11Q9UQG0 969 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 CNTNAP1P78357 1384 aa13.78□□□□□ -0.2
SMC5-201ENST00000361138 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
SMC5-201ENST00000361138 TSPAN1O60635 241 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 GABBR2O75899 941 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.2
SMC5-201ENST00000361138 PSMD4P55036 377 aaKnown RBP13.77□□□□□ -0.2
SMC5-201ENST00000361138 CDH12P55289 794 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 SMARCB1Q12824 385 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 FAM91A1Q658Y4 838 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 GPR153Q6NV75 609 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 BHLHB9Q6PI77 547 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 ZNF467Q7Z7K2 595 aaPredicted RBP13.77□□□□□ -0.2
SMC5-201ENST00000361138 KANSL3Q9P2N6 904 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 H7C0S8 307 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 CPNE3O75131 537 aaKnown RBP13.77□□□□□ -0.2
SMC5-201ENST00000361138 SERPINB7O75635 380 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 DHRS4L1P0CG22 281 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 AKR1D1P51857 326 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 ZNF181Q2M3W8 571 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 SLC2A7Q6PXP3 512 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 ITPKCQ96DU7 683 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 C11orf16Q9NQ32 467 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 MAP10Q9P2G4 905 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 KCNH4Q9UQ05 1017 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 MAN2B2Q9Y2E5 1009 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms