RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 INTS10Q9NVR2 710 aaKnown RBP18.82■□□□□ 0.6
HLA-DRB1-201ENST00000360004 LRIT1Q9P2V4 623 aa18.82■□□□□ 0.6
HLA-DRB1-201ENST00000360004 DMGDHQ9UI17 866 aaKnown RBP18.82■□□□□ 0.6
HLA-DRB1-201ENST00000360004 ACSL5Q9ULC5 683 aa18.82■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PLXNB3Q9ULL4 1909 aa18.82■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CFAP54Q96N23 3096 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 EME2A4GXA9 379 aaPredicted RBP18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 E5RI56 91 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 E7ESA3 106 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 TP73O15350 636 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 VIPP01282 170 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CDK4P11802 303 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 GLB1P16278 677 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SLC1A2P43004 574 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CARSP49589 748 aaKnown RBP18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 E2F1Q01094 437 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 DMPKQ09013 629 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CTBP1Q13363 440 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 FASTKD3Q14CZ7 662 aaKnown RBP18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 BRD3Q15059 726 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 ZDHHC24Q6UX98 284 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CILP2Q8IUL8 1156 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SFTPA2Q8IWL1 248 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 Q8N9G6 341 aaPredicted RBP18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SLC37A2Q8TED4 501 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 LINC00615Q96LM1 132 aaPredicted RBP18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 L2HGDHQ9H9P8 463 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 FBXO6Q9NRD1 293 aaPredicted RBP18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CRYL1Q9Y2S2 319 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PCDHB1Q9Y5F3 818 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PCDHGA1Q9Y5H4 931 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 COL5A1P20908 1838 aaPredicted RBP18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 DMXL1Q9Y485 3027 aa18.81■□□□□ 0.6
HLA-DRB1-201ENST00000360004 C17orf113A0A1B0GUU1 675 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 H3BMM5 538 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 IFRD1O00458 451 aaPredicted RBP18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 GP1BAP07359 652 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CSE1LP55060 971 aaKnown RBP18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 HHEXQ03014 270 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 TYSND1Q2T9J0 566 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 IYDQ6PHW0 289 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 FAM83HQ6ZRV2 1179 aaPredicted RBP18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 DENND6AQ8IWF6 608 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 UNC5BQ8IZJ1 945 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 TMEM159Q96B96 161 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SH3KBP1Q96B97 665 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SLC38A3Q99624 504 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CCDC3Q9BQI4 270 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PHACTR1Q9C0D0 580 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 WWP1Q9H0M0 922 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 TSPYL1Q9H0U9 437 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 COG4Q9H9E3 785 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SARS2Q9NP81 518 aaKnown RBP18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 IMP3Q9NV31 184 aaKnown RBP18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 ZFATQ9P243 1243 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 FBXO5Q9UKT4 447 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 RNF215Q9Y6U7 377 aa18.8■□□□□ 0.6
HLA-DRB1-201ENST00000360004 LY6G6EA0A0G2JKS1 128 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 LIN7AO14910 233 aaPredicted RBP18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SGTAO43765 313 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 NUDT21O43809 227 aaKnown RBP18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 EML2O95834 649 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 ESR1P03372 595 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 APOA4P06727 396 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CHRM3P20309 590 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 RPS3P23396 243 aaKnown RBP eCLIP18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 ALDH4A1P30038 563 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 MAGEA4P43358 317 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 MGAT5Q09328 741 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 FOXC1Q12948 553 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CUL1Q13616 776 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 N4BP2L1Q5TBK1 243 aaPredicted RBP18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 AGAP9Q5VTM2 703 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 METRNLQ641Q3 311 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 STEAP4Q687X5 459 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 DHRS13Q6UX07 377 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SLCO6A1Q86UG4 719 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 KRT222Q8N1A0 295 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SFRP1Q8N474 314 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SEC14L1Q92503 715 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 LPGAT1Q92604 370 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CDKL2Q92772 493 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 C9orf72Q96LT7 481 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 C12orf66Q96MD2 445 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 FMO2Q99518 471 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 CPNE7Q9UBL6 633 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 U3KQA8 63 aa18.79■□□□□ 0.6
HLA-DRB1-201ENST00000360004 KPNA5O15131 536 aa18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PKMP14618 531 aaKnown RBP18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 MAPK9P45984 424 aa18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PREPP48147 710 aa18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 MPP1Q00013 466 aa18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PLOD1Q02809 727 aaPredicted RBP18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 PERM1Q5SV97 790 aa18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 ABRAXAS1Q6UWZ7 409 aa18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 WASH2PQ6VEQ5 465 aa18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 SKA2Q8WVK7 121 aaPredicted RBP18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 AHCYL2Q96HN2 611 aaKnown RBP18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.78■□□□□ 0.6
HLA-DRB1-201ENST00000360004 WASH6PQ9NQA3 447 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms