RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 KDM1BQ8NB78 822 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 MAPK15Q8TD08 544 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 BIRC8Q96P09 236 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 ARPC5LQ9BPX5 153 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 CEP44Q9C0F1 390 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 BPIFA1Q9NP55 256 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 TRPV5Q9NQA5 729 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 OAS3Q9Y6K5 1087 aaKnown RBP13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 SLC30A1Q9Y6M5 507 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 NEMP2A6NFY4 417 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 VPS26AO75436 327 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 WASP42768 502 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 CCR10P46092 362 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 RAD51Q06609 339 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 ZNF234Q14588 700 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 EIF4HQ15056 248 aaKnown RBP13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 MMEL1Q495T6 779 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 DPY19L3Q6ZPD9 716 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 LYSMD3Q7Z3D4 306 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 PIANPQ8IYJ0 282 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 CHST14Q8NCH0 376 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 FRS2Q8WU20 508 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 DNASE1L2Q92874 299 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 CENPKQ9BS16 269 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 ZFYVE1Q9HBF4 777 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 CACNA2D2Q9NY47 1150 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 MED16Q9Y2X0 877 aa13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
CSNK1E-201ENST00000359867 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CCNT2O60583 730 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 EGFP01133 1207 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 ESR1P03372 595 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 UQCRBP14927 111 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CTPS1P17812 591 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 NNMTP40261 264 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CDKN1CP49918 316 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 ST8SIA6P61647 398 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 SETMARQ53H47 684 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 AAGABQ6PD74 315 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 KIAA1191Q96A73 305 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PTERQ96BW5 349 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CMTM5Q96DZ9 223 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 ASB2Q96Q27 587 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 LYSMD1Q96S90 227 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CPEB1Q9BZB8 566 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 SH3GLB1Q9Y371 365 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 COMMD3-BMI1R4GMX3 469 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 BOLA2-SMG1P6H3BVE0 249 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 K7EQS6 105 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 NEMP1O14524 444 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 SLC22A2O15244 555 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 VCLP18206 1134 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 ADSLP30566 484 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 HOXD12P35452 270 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 TIE1P35590 1138 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 IL12RB1P42701 662 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 KCNC1P48547 511 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PTPN5P54829 565 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 MYLK3Q32MK0 819 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 SLC44A4Q53GD3 710 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 C2orf27AQ580R0 203 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 ZNF678Q5SXM1 525 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 UGT3A1Q6NUS8 523 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PGM2L1Q6PCE3 622 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PAQR3Q6TCH7 311 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 SERPINA13PQ6UXR4 307 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 TPRG1Q6ZUI0 275 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PCDH20Q8N6Y1 951 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 OR2A12Q8NGT7 310 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 STAG3L4Q8TBR4 150 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 GRIN3AQ8TCU5 1115 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 KCNJ9Q92806 393 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 NMD3Q96D46 503 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 EID2BQ96D98 161 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 DHRS1Q96LJ7 313 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CYP4F12Q9HCS2 524 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 APPL1Q9UKG1 709 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CA14Q9ULX7 337 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PCDHGB4Q9UN71 923 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 CDYLQ9Y232 598 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PPIL1Q9Y3C6 166 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PCDHB1Q9Y5F3 818 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 PCDHGB5Q9Y5G0 923 aa13.67□□□□□ -0.22
CSNK1E-201ENST00000359867 A0A1W2PQ67 120 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 SRPRAP08240 638 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 ALPIP09923 528 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 COX4I1P13073 169 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 NAA20P61599 178 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 HERVK_113P63132 956 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 HPCAP84074 193 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 TMED1Q13445 227 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 PDK3Q15120 406 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 PTPRRQ15256 657 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 CDKN3Q16667 212 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms