RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 IQGAP3Q86VI3 1631 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CNPY1Q3B7I2 92 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CFAP206Q8IYR0 622 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 FITM2Q8N6M3 262 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 TMEM168Q9H0V1 697 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 DENND2DQ9H6A0 471 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 KCTD5Q9NXV2 234 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 SAP18O00422 153 aaKnown RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 ATG13O75143 517 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 MASP1P48740 699 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CLCQ05315 142 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 ABCA11PQ4W5N1 156 aa15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CIR1Q86X95 450 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 EFHD2Q96C19 240 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-203ENST00000359759 CD52P31358 61 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 BRCC3P46736 316 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 GRM3Q14832 879 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 QSOX2Q6ZRP7 698 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF557Q8N988 423 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 KXD1Q9BQD3 176 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 DUSP16Q9BY84 665 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 TREM1Q9NP99 234 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 RIMKLBQ9ULI2 386 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 NR2E1Q9Y466 385 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 OR6C70A6NIJ9 312 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 FSCN2O14926 492 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 OR1F1O43749 312 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 RORCP51449 518 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 MAPK12P53778 367 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF782Q6ZMW2 699 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 OR4C6Q8NH72 309 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 SMPDL3BQ92485 455 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 IKZF4Q9H2S9 585 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 MRPS33Q9Y291 106 aaKnown RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 SRRM3A6NNA2 597 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 CLDN25C9JDP6 229 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 CCRL2O00421 344 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 TRAFD1O14545 582 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 PDPK1O15530 556 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 CPNE3O75131 537 aaKnown RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 STBD1O95210 358 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 MTPNP58546 118 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 KAZALD1Q96I82 304 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 LENG8Q96PV6 779 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 TCRBV7S2A1N4TA0A589 114 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 ZNF99A8MXY4 864 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 PIP5K1BO14986 540 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 LHCGRP22888 699 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 KHDC1Q4VXA5 237 aaKnown RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 ARL13AQ5H913 290 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 POTEHQ6S545 545 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 ABCG4Q9H172 646 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 MED11Q9P086 117 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 WASF2Q9Y6W5 498 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 SHOX2O60902 331 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 PSMD10O75832 226 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 INMTO95050 263 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 GADD45GO95257 159 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 CXCL9Q07325 125 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 ZMYND11Q15326 602 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 GALNT7Q86SF2 657 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 KCNC2Q96PR1 638 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 IFT27Q9BW83 186 aa15.85■□□□□ 0.13
COL18A1-203ENST00000359759 GLIS2Q9BZE0 524 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-203ENST00000359759 KANTRA0A1W2PQU2 76 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 CXCR6O00574 342 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 GSTT2BP0CG30 244 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 PSEN1P49768 467 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 UGCGQ16739 394 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 FAM46CQ5VWP2 391 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 SLC8B1Q6J4K2 584 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 GPR153Q6NV75 609 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 LRRC55Q6ZSA7 311 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 FBXO15Q8NCQ5 510 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 TIMM8BQ9Y5J9 83 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 RAI2Q9Y5P3 530 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 A0A0G2JPF8 293 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 HNRNPCL3B7ZW38 293 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 OR4F21O95013 312 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 OR4Q2P0C623 313 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 HNRNPCL4P0DMR1 293 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 HSD3B2P26439 372 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 DRG2P55039 364 aaKnown RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 PITPNAQ00169 270 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 DSC2Q02487 901 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 ZDHHC21Q8IVQ6 265 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 ANKFN1Q8N957 763 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 KCT2Q8NC54 265 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 ALG3Q92685 438 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 RFKQ969G6 155 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 SLC38A4Q969I6 547 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 AGAP2Q99490 1192 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 HMX1Q9NP08 348 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 TAS2R7Q9NYW3 318 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 CFAP97Q9P2B7 532 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 SNX10Q9Y5X0 201 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 LOC100509620A0A075B734 347 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms