RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PDFQ9HBH1 243 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 INTS10Q9NVR2 710 aaKnown RBP8.15□□□□□ -1.1
CD46-205ENST00000358170 AIG1Q9NVV5 245 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 TMEM161AQ9NX61 479 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 VPS4AQ9UN37 437 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 PRSS21Q9Y6M0 314 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 SCN10AQ9Y5Y9 1956 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 BBIP1A8MTZ0 92 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 KDELR3O43731 214 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 ZBTB11O95625 1053 aaPredicted RBP8.15□□□□□ -1.1
CD46-205ENST00000358170 MLYCDO95822 493 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 EPOP01588 193 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 CKMP06732 381 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 SLC26A3P40879 764 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 CSKP41240 450 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 RPS9P46781 194 aaKnown RBP8.15□□□□□ -1.1
CD46-205ENST00000358170 PGS1Q32NB8 556 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 XKR5Q6UX68 686 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 RFLNAQ6ZTI6 216 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 TMEM26Q6ZUK4 368 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 GOLGA7Q7Z5G4 137 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 GALNT10Q86SR1 603 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 ADGRG2Q8IZP9 1017 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 APCDD1Q8J025 514 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 SGCDQ92629 289 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 EID2BQ96D98 161 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 THAP11Q96EK4 314 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 GPATCH1Q9BRR8 931 aaKnown RBP8.15□□□□□ -1.1
CD46-205ENST00000358170 IRAK4Q9NWZ3 460 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 GALNT8Q9NY28 637 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 AASSQ9UDR5 926 aa8.15□□□□□ -1.1
CD46-205ENST00000358170 TDRKHQ9Y2W6 561 aaKnown RBP8.15□□□□□ -1.1
CD46-205ENST00000358170 CDH23Q9H251 3354 aa8.15□□□□□ -1.11
CD46-205ENST00000358170 E2F3O00716 465 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 FFAR2O15552 330 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 AP1G1O43747 822 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 CDK4P11802 303 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 WEE1P30291 646 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 MAGEA11P43364 429 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 GSSP48637 474 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 ERVK-8P63133 956 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 SREBF2Q12772 1141 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 SPANXN4Q5MJ08 99 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 ADGRF1Q5T601 910 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 SPESP1Q6UW49 350 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 ANKS3Q6ZW76 656 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 TSPAN33Q86UF1 283 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 RNF175Q8N4F7 328 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 TMEM199Q8N511 208 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 MINDY1Q8N5J2 469 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 BPIFB6Q8NFQ5 453 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.14□□□□□ -1.11
CD46-205ENST00000358170 FAM162AQ96A26 154 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 MUS81Q96NY9 551 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 DGCR6LQ9BY27 220 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 ACTR8Q9H981 624 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 CXorf21Q9HAI6 301 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 A0A1B0GVM2 712 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 A0A1W2PPW3 197 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 CAPN15O75808 1086 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 WISP3O95389 354 aaPredicted RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 TSPAN12O95859 305 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 RPS17P08708 135 aaKnown RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 BMP2P12643 396 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 IL7RP16871 459 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 ENTPD1P49961 510 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 NFKB2Q00653 900 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 SP3Q02447 781 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 CHRNB3Q05901 458 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 BOP1Q14137 746 aaKnown RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 TYSND1Q2T9J0 566 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 LDLRAP1Q5SW96 308 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 PRMT9Q6P2P2 845 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 DTWD1Q8N5C7 304 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 PNPT1Q8TCS8 783 aaKnown RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 MYRFLQ96LU7 910 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 ZBTB18Q99592 522 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 SLC2A11Q9BYW1 496 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 DPY30Q9C005 99 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 PAIP1Q9H074 479 aaKnown RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.14□□□□□ -1.11
CD46-205ENST00000358170 SMPD3Q9NY59 655 aaPredicted RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 VAPAQ9P0L0 249 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 SARDHQ9UL12 918 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 PCDHA9Q9Y5H5 950 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 A0A087WXM4 84 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 A0A1W2PQ45 241 aaPredicted RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 A0A1W2PQY0 241 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 AQP12BA6NM10 295 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 LOC730098B7Z3J9 87 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 DIRAS1O95057 198 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 MTHFRP42898 656 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 CASP9P55211 416 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 TXNL4AP83876 142 aaKnown RBP8.14□□□□□ -1.11
CD46-205ENST00000358170 BNIP2Q12982 314 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 PMS2P3Q13401 168 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 APOFQ13790 326 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 GTF2H3Q13889 308 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 RCAN2Q14206 197 aa8.14□□□□□ -1.11
CD46-205ENST00000358170 CHRNA6Q15825 494 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms