RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 GIPC2Q8TF65 315 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 ANKRD49Q8WVL7 239 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 TRAPPC12Q8WVT3 735 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 VPS33AQ96AX1 596 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 SEPHS2Q99611 448 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 AMBRA1Q9C0C7 1298 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.72
CAPN3-205ENST00000357568 ALG9Q9H6U8 611 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 POU2F3Q9UKI9 436 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 RABL2BQ9UNT1 228 aa10.52□□□□□ -0.72
CAPN3-205ENST00000357568 ZFC3H1O60293 1989 aaKnown RBP10.52□□□□□ -0.72
CAPN3-205ENST00000357568 LOC100130705A0A1B0GUX0 176 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 MBLAC1A4D2B0 266 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-205ENST00000357568 TBKBP1A7MCY6 615 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 FGF10O15520 208 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-205ENST00000357568 PRKD3O94806 890 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 INMTO95050 263 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 INSRRP14616 1297 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 TCF3P15923 654 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 CHRM3P20309 590 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 TRPC1P48995 793 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 EMX1Q04741 257 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-205ENST00000357568 SF3B4Q15427 424 aaKnown RBP eCLIP10.52□□□□□ -0.737e-8■■■■□ 26.4
CAPN3-205ENST00000357568 MEP1AQ16819 746 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 GEN1Q17RS7 908 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 PGS1Q32NB8 556 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 SV2CQ496J9 727 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 PAGE3Q5JUK9 113 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 ANKRD33Q7Z3H0 272 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 LYSMD2Q8IV50 215 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 ATPAF2Q8N5M1 289 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 APPL2Q8NEU8 664 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 C18orf25Q96B23 403 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-205ENST00000357568 PAWRQ96IZ0 340 aaKnown RBP10.52□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF599Q96NL3 588 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 SNX18Q96RF0 628 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 COLEC11Q9BWP8 271 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 DGCR6LQ9BY27 220 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 FAM49AQ9H0Q0 323 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-205ENST00000357568 GABARAPL1Q9H0R8 117 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 TM9SF3Q9HD45 589 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 UBP1Q9NZI7 540 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF229Q9UJW7 825 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 DSEQ9UL01 958 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 EIF3LQ9Y262 564 aaKnown RBP10.52□□□□□ -0.73
CAPN3-205ENST00000357568 PMF1-BGLAPU3KQ54 211 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 MYLKQ15746 1914 aa10.52□□□□□ -0.73
CAPN3-205ENST00000357568 ANKRD34BA5PLL1 514 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 STX16O14662 325 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 SNX4O95219 450 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 SEC24AO95486 1093 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 CHEK2O96017 543 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 CES1P23141 567 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 BDNFP23560 247 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ST13P50502 369 aaKnown RBP10.51□□□□□ -0.73
CAPN3-205ENST00000357568 OR4D2P58180 307 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 KCNAB2Q13303 367 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 DNASE1L3Q13609 305 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 PLEKHG6Q3KR16 790 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 DSG4Q86SJ6 1040 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ZBTB46Q86UZ6 589 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 HIPK1Q86Z02 1210 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 RNF135Q8IUD6 432 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ADHFE1Q8IWW8 467 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ELMOD1Q8N336 334 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 DTWD1Q8N5C7 304 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 GPR150Q8NGU9 434 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 MRGPRX2Q96LB1 330 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 FSD1LQ9BXM9 530 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 HEBP1Q9NRV9 189 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 OSER1Q9NX31 292 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ITM2BQ9Y287 266 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 I6L893 689 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-205ENST00000357568 AURKAO14965 403 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 SNPHO15079 494 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 LRIG2O94898 1065 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 SCELO95171 688 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 S1PR4O95977 384 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 RPS17P08708 135 aaKnown RBP10.51□□□□□ -0.73
CAPN3-205ENST00000357568 UROSP10746 265 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF45Q02386 682 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 PRKG2Q13237 762 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 KEAP1Q14145 624 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 IMPG1Q17R60 797 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 RAB41Q5JT25 222 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 TXNDC11Q6PKC3 985 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 KDELC1Q6UW63 502 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 RPS27LQ71UM5 84 aaKnown RBP10.51□□□□□ -0.73
CAPN3-205ENST00000357568 C14orf80Q86SX3 495 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 IFNEQ86WN2 208 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 HEATR4Q86WZ0 1026 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 SPATA22Q8NHS9 363 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 RASSF5Q8WWW0 418 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 PTERQ96BW5 349 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF668Q96K58 619 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-205ENST00000357568 ATOH8Q96SQ7 321 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 LPIN3Q9BQK8 851 aa10.51□□□□□ -0.73
CAPN3-205ENST00000357568 TRIM62Q9BVG3 475 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms