RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 BOP1Q14137 746 aaKnown RBP24.94■■□□□ 1.58
SSBP3-202ENST00000357475 INSCQ1MX18 579 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 KRT71Q3SY84 523 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 TMEM207Q6UWW9 146 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 NRROSQ86YC3 692 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 CD200R1Q8TD46 325 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 LRRC61Q9BV99 259 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 ROPN1BQ9BZX4 212 aaPredicted RBP24.94■■□□□ 1.58
SSBP3-202ENST00000357475 ROPN1Q9HAT0 212 aaPredicted RBP24.94■■□□□ 1.58
SSBP3-202ENST00000357475 KLC4Q9NSK0 619 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 APOBEC3BQ9UH17 382 aaKnown RBP24.94■■□□□ 1.58
SSBP3-202ENST00000357475 SLC6A14Q9UN76 642 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 COMMD10Q9Y6G5 202 aa24.94■■□□□ 1.58
SSBP3-202ENST00000357475 H3BMM5 538 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 TPP1O14773 563 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 SDC3O75056 442 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 CDH16O75309 829 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 AOAHP28039 575 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 PREPP48147 710 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 IL9RQ01113 521 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 AMZ2Q86W34 360 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 VRK3Q8IV63 474 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 OR2L2Q8NH16 312 aa24.93■■□□□ 1.58
SSBP3-202ENST00000357475 TSR3Q9UJK0 312 aaKnown RBP24.93■■□□□ 1.58
SSBP3-202ENST00000357475 A0A1W2PPM1 405 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 MGAT4DA6NG13 374 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 QSOX1O00391 747 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 KRT38O76015 456 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 RETP07949 1114 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 SNRPAP09012 282 aaKnown RBP24.92■■□□□ 1.58
SSBP3-202ENST00000357475 POU4F1Q01851 419 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 HLA-BQ31612 363 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 PRRT3Q5FWE3 981 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 PPM1JQ5JR12 505 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 PAQR3Q6TCH7 311 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 RABEPKQ7Z6M1 372 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 CFAP206Q8IYR0 622 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 PANX3Q96QZ0 392 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 PHOX2BQ99453 314 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 TIMM29Q9BSF4 260 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 KCNH6Q9H252 994 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 ERVMER34-1Q9H9K5 563 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 PPCSQ9HAB8 311 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 SNX15Q9NRS6 342 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 SPATS2LQ9NUQ6 558 aaKnown RBP24.92■■□□□ 1.58
SSBP3-202ENST00000357475 UCKL1Q9NWZ5 548 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 TAS2R13Q9NYV9 303 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 RAPGEFL1Q9UHV5 662 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 CDYLQ9Y232 598 aa24.92■■□□□ 1.58
SSBP3-202ENST00000357475 PRR19A6NJB7 356 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 DYNC1I1O14576 645 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 MAP2K7O14733 419 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 VPS26AO75436 327 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 CSRP3P50461 194 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 RASA2Q15283 850 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 ZKSCAN8Q15776 578 aaPredicted RBP24.91■■□□□ 1.58
SSBP3-202ENST00000357475 CPNE9Q8IYJ1 553 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 ZBTB2Q8N680 514 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 ELF4Q99607 663 aaPredicted RBP24.91■■□□□ 1.58
SSBP3-202ENST00000357475 SLC13A1Q9BZW2 595 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 COG4Q9H9E3 785 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 TRNAU1APQ9NX07 287 aaKnown RBP24.91■■□□□ 1.58
SSBP3-202ENST00000357475 LGALS13Q9UHV8 139 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 DHRS7Q9Y394 339 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 DNMT3AQ9Y6K1 912 aaPredicted RBP24.91■■□□□ 1.58
SSBP3-202ENST00000357475 ARHGEF17Q96PE2 2063 aaPredicted RBP24.91■■□□□ 1.58
SSBP3-202ENST00000357475 RFPL1O75677 317 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 KRT37O76014 449 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 WISP3O95389 354 aaPredicted RBP24.91■■□□□ 1.58
SSBP3-202ENST00000357475 EML2O95834 649 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 CNTFP26441 200 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 PDHA2P29803 388 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 HSPA14Q0VDF9 509 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 BNIP3Q12983 259 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 ZNF423Q2M1K9 1284 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 ACSBG2Q5FVE4 666 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 SLC30A9Q6PML9 568 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 TAOK1Q7L7X3 1001 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 OTOAQ7RTW8 1153 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 HM13Q8TCT9 377 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 GPBAR1Q8TDU6 330 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 IRF2BPLQ9H1B7 796 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 OSGEPL1Q9H4B0 414 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 LATS2Q9NRM7 1088 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 TRMT6Q9UJA5 497 aaKnown RBP24.91■■□□□ 1.58
SSBP3-202ENST00000357475 GMEB2Q9UKD1 530 aa24.91■■□□□ 1.58
SSBP3-202ENST00000357475 IQANK1A0A1B0GTG1 560 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 SLC5A10A0PJK1 596 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 ARHGAP33O14559 1287 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 SLC35E2BP0CK96 405 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 CTSEP14091 401 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 MAGEA12P43365 314 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 BLKP51451 505 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 RAB10P61026 200 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 PDAP1Q13442 181 aaKnown RBP24.9■■□□□ 1.58
SSBP3-202ENST00000357475 SF3A2Q15428 464 aaKnown RBP24.9■■□□□ 1.58
SSBP3-202ENST00000357475 SEPT7Q16181 437 aaKnown RBP24.9■■□□□ 1.58
SSBP3-202ENST00000357475 SFTPA2Q8IWL1 248 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 LMX1AQ8TE12 382 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 ANKRD49Q8WVL7 239 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms