RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CIR1Q86X95 450 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 SFRP1Q8N474 314 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 MINDY1Q8N5J2 469 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDYL2Q8N8U2 506 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 PSMG2Q969U7 264 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.14□□□□□ -1.117e-6■■■■■ 27.5
CDC42SE1-201ENST00000357235 B3GALT6Q96L58 329 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 DEPDC7Q96QD5 511 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMEM209Q96SK2 561 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 IL12RB2Q99665 862 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 TBCDQ9BTW9 1192 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 LHPPQ9H008 270 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 AGO3Q9H9G7 860 aaKnown RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 SMURF2Q9HAU4 748 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 AKIP1Q9NQ31 210 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZW10O43264 779 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 SNX2O60749 519 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 CNTN5O94779 1100 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GOT2P00505 430 aaKnown RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 C1RP00736 705 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 HAPLN1P10915 354 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 HSD17B1P14061 328 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 SHMT2P34897 504 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GGT5P36269 586 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 LHX1P48742 406 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 SCNN1GP51170 649 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 RACK1P63244 317 aaKnown RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GALK2Q01415 458 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 STK11Q15831 433 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 MEP1AQ16819 746 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 AAK1Q2M2I8 961 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 AASDHQ4L235 1098 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 BLOC1S3Q6QNY0 202 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 HACD2Q6Y1H2 254 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 FKBP9P1Q75LS8 142 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GALNT7Q86SF2 657 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 TBC1D21Q8IYX1 336 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 DTX3Q8N9I9 347 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR10Q1Q8NGQ4 319 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 ITFG1Q8TB96 612 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 SNX19Q92543 992 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMEM125Q96AQ2 219 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 HMCESQ96FZ2 354 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 SNX18Q96RF0 628 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 CD320Q9NPF0 282 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABI2Q9NYB9 513 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 MTRRQ9UBK8 725 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 ENPP5Q9UJA9 477 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 COL1A2P08123 1366 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 E9PAM4 449 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 BTN3A1O00481 513 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC22A3O75751 556 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ARHGEF15O94989 841 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SNAI1O95863 264 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 DLGAP3O95886 979 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GSNP06396 782 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 THP07101 528 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 KCNE1P15382 129 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CD1DP15813 335 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TCF3P15923 654 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PKLRP30613 574 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CASP3P42574 277 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 NRG1Q02297 640 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDC20Q12834 499 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 DGCR6Q14129 220 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 FSCN1Q16658 493 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SIRPB2Q5JXA9 342 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 UBXN11Q5T124 520 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 BROXQ5VW32 411 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ANKRD34AQ69YU3 496 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TIGD7Q6NT04 549 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 C8orf82Q6P1X6 216 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PAQR3Q6TCH7 311 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CRTC3Q6UUV7 619 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GLRX5Q86SX6 157 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 MIB1Q86YT6 1006 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 BEND7Q8N7W2 519 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GRPEL2Q8TAA5 225 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZFP90Q8TF47 636 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMBIM1Q969X1 311 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC10A4Q96EP9 437 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDCA5Q96FF9 252 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 DUS3LQ96G46 650 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMEM246Q9BRR3 403 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 THUMPD3Q9BV44 507 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SP140LQ9H930 580 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SDR39U1Q9NRG7 319 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 INTS10Q9NVR2 710 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GALPQ9UBC7 116 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABCD2Q9UBJ2 740 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ATPIF1Q9UII2 106 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 OAS3Q9Y6K5 1087 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TTC3P53804 2025 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 A0A1W2PP18 115 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 RRN3P2A6NIE6 340 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 FADS2P1A8MWK0 482 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDC7O00311 574 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GABRDO14764 452 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GSTA4O15217 222 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms