RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 HCN1O60741 890 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RLN1P04808 185 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 OR1E1P30953 314 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PBX3P40426 434 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CCNFP41002 786 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CACNG1Q06432 222 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 BAATQ14032 418 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SPIN4Q56A73 249 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PTCHD4Q6ZW05 846 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CHSY3Q70JA7 882 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 HJURPQ8NCD3 748 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 DNAJB14Q8TBM8 379 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 TAS2R8Q9NYW2 309 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SIX4Q9UIU6 781 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SLITRK3O94933 977 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 BMP2P12643 396 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ILF3Q12906 894 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 IRAK1BP1Q5VVH5 260 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ESRP1Q6NXG1 681 aaKnown RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 MTSS1LQ765P7 747 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 GLT6D1Q7Z4J2 308 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 METTL25Q8N6Q8 603 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 HTRA1Q92743 480 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 TNFRSF25Q93038 417 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ISOC1Q96CN7 298 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 LRTM1Q9HBL6 345 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ATF5Q9Y2D1 282 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ARL4DP49703 201 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ERFP50548 548 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SPP2Q13103 211 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CBWD6Q4V339 395 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SH3PXD2AQ5TCZ1 1133 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 OR2T5Q6IEZ7 315 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PLEKHG7Q6ZR37 379 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 OR2T29Q8NH02 315 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 KAT2AQ92830 837 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CHFRQ96EP1 664 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 NUAK1O60285 661 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SNX4O95219 450 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 TRAPPC2P0DI81 140 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 TRAPPC2BP0DI82 140 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ERVK-10P10266 1014 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CETPP11597 493 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SP140Q13342 867 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 DEF8Q6ZN54 512 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RTL4Q6ZR62 310 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 REPS2Q8NFH8 660 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 HDAC10Q969S8 669 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CITED4Q96RK1 184 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 OXSMQ9NWU1 459 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 KCNIP3Q9Y2W7 256 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 KIAA1217Q5T5P2 1943 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CDK5RAP2Q96SN8 1893 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 MICAL2O94851 1124 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 DSG3P32926 999 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RGS1Q08116 209 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 LSAMPQ13449 338 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C11orf91Q3C1V1 193 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CDC42EP5Q6NZY7 148 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C10orf53Q8N6V4 93 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CYP2W1Q8TAV3 490 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 AKT1S1Q96B36 256 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PPCDCQ96CD2 204 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CYP2S1Q96SQ9 504 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PXMP2Q9NR77 195 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 TOR4AQ9NXH8 423 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PIM2Q9P1W9 311 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF282Q9UDV7 671 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C9P02748 559 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RHOCP08134 193 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 EPHB3P54753 998 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SCARF1Q14162 830 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 EIF4HQ15056 248 aaKnown RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 TIGD6Q17RP2 521 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 TEX44Q53QW1 395 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PIGGQ5H8A4 983 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C2orf69Q8N8R5 385 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CELF1Q92879 486 aaKnown RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 POLR2J3Q9H1A7 115 aaKnown RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SAV1Q9H4B6 383 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 FANCFQ9NPI8 374 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 MAN1C1Q9NR34 630 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C17orf102A2RUQ5 167 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 EPHA3P29320 983 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 LCN1P31025 176 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PPP3R1P63098 170 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 BIKQ13323 160 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 IQSEC1Q6DN90 963 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CAPN13Q6MZZ7 669 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SYT15Q9BQS2 421 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 NANSQ9NR45 359 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PSIP1O75475 530 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 DPYSL2Q16555 572 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 NADK2Q4G0N4 442 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SIX5Q8N196 739 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 MTFR1LQ9H019 292 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TRIT1Q9H3H1 467 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PLEKHA6Q9Y2H5 1048 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SCN4AP35499 1836 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms