RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 UGT1A3P35503 534 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 UGT1A5P35504 534 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 PPARGP37231 505 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 ACTR1BP42025 376 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 PRLHRP49683 370 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 ACTR1AP61163 376 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 SIM1P81133 766 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 TMEM115Q12893 351 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 INSCQ1MX18 579 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 C14orf28Q4W4Y0 310 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF648Q5T619 568 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 RNF187Q5TA31 235 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 AGAP9Q5VTM2 703 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 HIBCHQ6NVY1 386 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 CERS6Q6ZMG9 384 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 SERPINA9Q86WD7 417 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 C17orf82Q86X59 251 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 TRAPPC5Q8IUR0 188 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 SLC35F3Q8IY50 421 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 RASGEF1AQ8N9B8 481 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 GPR156Q8NFN8 814 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 WDR48Q8TAF3 677 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 HM13Q8TCT9 377 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 ADAMTS14Q8WXS8 1223 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF669Q96BR6 464 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 LRRC39Q96DD0 335 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 STAMBPL1Q96FJ0 436 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 LINC00615Q96LM1 132 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 NAT9Q9BTE0 207 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 RAB17Q9H0T7 212 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 SUDS3Q9H7L9 328 aaPredicted RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 VPS37BQ9H9H4 285 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 UGT1A7Q9HAW7 530 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 UGT1A10Q9HAW8 530 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 UGT1A8Q9HAW9 530 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 ARFGAP3Q9NP61 516 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 CATSPERZQ9NTU4 200 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 NOP53Q9NZM5 478 aaKnown RBP3.91□□□□□ -1.78
CNOT4-202ENST00000356162 WHRNQ9P202 907 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 SLC2A6Q9UGQ3 507 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 PIEZO1Q92508 2521 aa3.91□□□□□ -1.78
CNOT4-202ENST00000356162 KIR2DS5A0A0G2JLQ3 304 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 A0A0G2JNG1 304 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 MAGEB16A2A368 324 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CCDC78A2IDD5 438 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 EME2A4GXA9 379 aaPredicted RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 A6NCN8 305 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 OR51F1A6NGY5 319 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 SDR42E2A6NKP2 422 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 OR5K4A6NMS3 321 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 KIR2DS3K7RE56 304 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 PFDN6O15212 129 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 EIF3HO15372 352 aaKnown RBP eCLIP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 MTX2O75431 263 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 USP1O94782 785 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 TTC4O95801 387 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 ATP1B2P14415 290 aaPredicted RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 PNLIPP16233 465 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 PGAM1P18669 254 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 ALAS2P22557 587 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 RPS3P23396 243 aaKnown RBP eCLIP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 AK4P27144 223 aaPredicted RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 NMBRP28336 390 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 PMLP29590 882 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 NSG1P42857 185 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 RPL21P46778 160 aaKnown RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CTSCP53634 463 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 ITGA8P53708 1063 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 TERF1P54274 439 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 ARL4CP56559 192 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CRADDP78560 199 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 B4GALNT1Q00973 533 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 E2F1Q01094 437 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CAV1Q03135 178 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CALCOCO2Q13137 446 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 HLTFQ14527 1009 aaKnown RBP eCLIP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 KIR2DS5Q14953 304 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 NR1D2Q14995 579 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CLPPQ16740 277 aaPredicted RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 TYSND1Q2T9J0 566 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 FASTKD1Q53R41 847 aaKnown RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 N4BP2L1Q5TBK1 243 aaPredicted RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 STEAP4Q687X5 459 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 DUPD1Q68J44 220 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 C8orf74Q6P047 294 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 SLC30A9Q6PML9 568 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 TMEM220Q6QAJ8 160 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 WASH2PQ6VEQ5 465 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 TAS2R42Q7RTR8 314 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 EFL1Q7Z2Z2 1120 aaKnown RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF438Q7Z4V0 828 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 RAB44Q7Z6P3 723 aaPredicted RBP3.9□□□□□ -1.78
CNOT4-202ENST00000356162 C11orf96Q7Z7L8 435 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 LRRC6Q86X45 466 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CCNJLQ8IV13 435 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF547Q8IVP9 402 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 LMNTD2Q8IXW0 634 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 CACTIN-AS1Q8N1I8 211 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 MMGT1Q8N4V1 131 aa3.9□□□□□ -1.78
CNOT4-202ENST00000356162 FAM46DQ8NEK8 389 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms