RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CLNKQ7Z7G1 428 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 COMMD2Q86X83 199 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 NRSN1Q8IZ57 195 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 ADAMTS15Q8TE58 950 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 FNDC11Q9BVV2 318 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 HEBP2Q9Y5Z4 205 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 ITPRIPL2Q3MIP1 535 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 EOGTQ5NDL2 527 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 B3GNT9Q6UX72 402 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 PRICKLE1Q96MT3 831 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 TFB2MQ9H5Q4 396 aaKnown RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 ATP6V1HQ9UI12 483 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 PRPF19Q9UMS4 504 aaKnown RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 DHRS12A0PJE2 317 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 CCDC189A1A4V9 331 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 NBNO60934 754 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 RFPL2O75678 378 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 HLA-DQA2P01906 255 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 FYNP06241 537 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 TCF3P15923 654 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 GNAZP19086 355 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 NT5EP21589 574 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 DHPSP49366 369 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 NEK2P51955 445 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 MINDY4Q4G0A6 757 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 AMIGO2Q86SJ2 522 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 RALGPS2Q86X27 583 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 FBXW8Q8N3Y1 598 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 LIX1Q8N485 282 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 OR52L1Q8NGH7 329 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 HOPXQ9BPY8 73 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 STRA6Q9BX79 667 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 LRMDAQ9H2I8 198 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 DDX18Q9NVP1 670 aaKnown RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 FETUBQ9UGM5 382 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 MYRFQ9Y2G1 1151 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 ZNF840PA6NDX5 716 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 NEMP2A6NFY4 417 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 AGPSO00116 658 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 CFIP05156 583 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 CCNFP41002 786 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 CACNA2D1P54289 1103 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 DEFA1P59665 94 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 DEFA3P59666 94 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 TPRG1Q6ZUI0 275 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 ZNF598Q86UK7 904 aaKnown RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 SVOPQ8N4V2 548 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 ZNF184Q99676 751 aaPredicted RBP14.7□□□□□ -0.06
COL17A1-201ENST00000353479 BTBD1Q9H0C5 482 aa14.7□□□□□ -0.06
COL17A1-201ENST00000353479 GNSP15586 552 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 MTAPQ13126 283 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 MRPL10Q7Z7H8 261 aaKnown RBP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 PYCR2Q96C36 320 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 SHDQ96IW2 340 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 NKX2-4Q9H2Z4 354 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 SFXN1Q9H9B4 322 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 EXD2Q9NVH0 621 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 PHF24Q9UPV7 400 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 MYL12BO14950 172 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 NPHS1O60500 1241 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 ITGB1P05556 798 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 CCDC159P0C7I6 412 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 GHRHRQ02643 423 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 ARMC8Q8IUR7 673 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 ADGRG2Q8IZP9 1017 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 C8orf59Q8N0T1 100 aaPredicted RBP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 XAGE5Q8WWM1 108 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 VPS35Q96QK1 796 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 PCBD2Q9H0N5 130 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 DDX28Q9NUL7 540 aaKnown RBP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 MTRRQ9UBK8 725 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 LRCH1Q9Y2L9 728 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 SAMHD1Q9Y3Z3 626 aaKnown RBP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 BACE2Q9Y5Z0 518 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 PI15O43692 258 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 OR10H3O60404 316 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 RALGDSQ12967 914 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 MSS51Q4VC12 460 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 IGSF8Q969P0 613 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 SLC47A1Q96FL8 570 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 BTBD9Q96Q07 612 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 SPHK2Q9NRA0 654 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 DDX60Q8IY21 1712 aaKnown RBP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 HNRNPA1P09651 372 aaKnown RBP eCLIP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 BMPR1AP36894 532 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 PLEKHG6Q3KR16 790 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 PROSER1Q86XN7 944 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 DCAKDQ8WVC6 231 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 GRIP2Q9C0E4 1043 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 MRPS30Q9NP92 439 aaKnown RBP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 SLC25A12O75746 678 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 OAZ2O95190 189 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 ATP1B2P14415 290 aaPredicted RBP14.69□□□□□ -0.06
COL17A1-201ENST00000353479 MTHFRP42898 656 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 PLA2G16P53816 162 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 GSTCDQ8NEC7 633 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 HERC2P3Q9BVR0 1158 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 NDUFA13Q9P0J0 144 aa14.69□□□□□ -0.06
COL17A1-201ENST00000353479 ADGRE2Q9UHX3 823 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms