RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 KLHL28Q9NXS3 571 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 RPS6KA6Q9UK32 745 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 FBXO10Q9UK96 956 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 KLHL20Q9Y2M5 609 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 KLHL33A6NCF5 533 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 M0R3G1 203 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 INPP4BO15327 924 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TSC22D2O75157 780 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 SIN3BO75182 1162 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 RPL38P63173 70 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 RGS1Q08116 209 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 FCHO2Q0JRZ9 810 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 LSM12Q3MHD2 195 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 IGDCC3Q8IVU1 814 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 OR6Y1Q8NGX8 325 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 SLC39A13Q96H72 371 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 IPPKQ9H8X2 491 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 FBRSQ9HAH7 460 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 LRTM1Q9HBL6 345 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 DAPK2Q9UIK4 370 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 PRR23D1E9PI22 279 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TK2O00142 265 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 SMNDC1O75940 238 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ADH1BP00325 375 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 PRR23D2P0DMB1 279 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 NRIP1P48552 1158 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 IDH3AP50213 366 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 CCT8P50990 548 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 CSTF3Q12996 717 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 UBAP2LQ14157 1087 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TRIM25Q14258 630 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 PHKG1Q16816 387 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 CHSY3Q70JA7 882 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 GPR180Q86V85 440 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 GALNT13Q8IUC8 556 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 CROCCP3Q8IVE0 287 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 CPNE9Q8IYJ1 553 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 KIAA1191Q96A73 305 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 RAD51AP1Q96B01 352 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 NECTIN4Q96NY8 510 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 FERD3LQ96RJ6 166 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ITM2CQ9NQX7 267 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ATXN10Q9UBB4 475 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ANAPC2Q9UJX6 822 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 INVSQ9Y283 1065 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 RNASEH2AO75792 299 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 CREB1P16220 341 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 CSNK1DP48730 415 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 TCEA2Q15560 299 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 LDB1Q86U70 411 aaPredicted RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 STX12Q86Y82 276 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 PGAM4Q8N0Y7 254 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 SIDT2Q8NBJ9 832 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 MGME1Q9BQP7 344 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 SLC29A3Q9BZD2 475 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 NMUR2Q9GZQ4 415 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 MYH10P35580 1976 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 PRR5-ARHGAP8B1AHC4 643 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 CXCL10P02778 98 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 EIF2S1P05198 315 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 CNPP09543 421 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 ARHGAP8P85298 464 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 LMAN2Q12907 356 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 KCNC3Q14003 757 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 POM121L1PQ3SYA9 428 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 ARSIQ5FYB1 569 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 LY6G5CQ5SRR4 150 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 NCEH1Q6PIU2 408 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 ZBTB49Q6ZSB9 765 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 HTR3DQ70Z44 454 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 C11orf96Q7Z7L8 435 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 NPWQ8N729 165 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 TERB1Q8NA31 727 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 CYGBQ8WWM9 190 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 BBS4Q96RK4 519 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 TDRD1Q9BXT4 1180 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 FAM192AQ9GZU8 254 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 ARL8BQ9NVJ2 186 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 WDR70Q9NW82 654 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 ITM2BQ9Y287 266 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 K7EPI3 171 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 CDH13P55290 713 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 TSNQ15631 228 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF776Q68DI1 518 aaPredicted RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 LRRC74BQ6ZQY2 392 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 RD3Q7Z3Z2 195 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 NOL6Q9H6R4 1146 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 DDX18Q9NVP1 670 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 SIRPGQ9P1W8 387 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 LINC00032P0C843 101 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF23P17027 643 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 SYN1P17600 705 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 PSMC3P17980 439 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 HOXC13P31276 330 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 TRIM71Q2Q1W2 868 aaKnown RBP12□□□□□ -0.49
SMAD9-201ENST00000350148 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 GALNT4Q8N4A0 578 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 PRRG3Q9BZD7 231 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 VPS4AQ9UN37 437 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 BTRCQ9Y297 605 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms