RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FCHO2Q0JRZ9 810 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TBL3Q12788 808 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 GRIK2Q13002 908 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CUL3Q13618 768 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 ARHGEF7Q14155 803 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MAPRE2Q15555 327 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PHKG1Q16816 387 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 HNRNPA1L2Q32P51 320 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 LRIT3Q3SXY7 679 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TTLL9Q3SXZ7 439 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PREPLQ4J6C6 727 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 RARS2Q5T160 578 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SWT1Q5T5J6 900 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 C9orf64Q5T6V5 341 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SULT1C3Q6IMI6 304 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SYCE2Q6PIF2 218 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 C16orf89Q6UX73 402 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 LIPIQ6XZB0 460 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 HACD2Q6Y1H2 254 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 RIPOR1Q6ZS17 1223 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 GPRIN3Q6ZVF9 776 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 Q6ZVL8 140 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 NEK10Q6ZWH5 1172 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PARS2Q7L3T8 475 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MYLK4Q86YV6 388 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 NRSN1Q8IZ57 195 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 DEFB107AQ8IZN7 70 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 DSELQ8IZU8 1212 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PGAM4Q8N0Y7 254 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 KYQ8NBH2 561 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 DDHD1Q8NEL9 900 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TMIEQ8NEW7 156 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 NAT14Q8WUY8 206 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 RHBDF1Q96CC6 855 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TIFAQ96CG3 184 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MARK4Q96L34 752 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 COQ10AQ96MF6 247 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 FAM161BQ96MY7 647 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 VPS35Q96QK1 796 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CCT7Q99832 543 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 LRFN3Q9BTN0 628 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 HGH1Q9BTY7 390 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 FAM126AQ9BYI3 521 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 NKX2-4Q9H2Z4 354 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TMEM245Q9H330 911 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 EBF3Q9H4W6 596 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 AKTIPQ9H8T0 292 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CERS4Q9HA82 394 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SEMA4BQ9NPR2 832 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TMEM45AQ9NWC5 275 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 NDE1Q9NXR1 346 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CD274Q9NZQ7 290 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 DEC1Q9P2X7 70 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SUN2Q9UH99 717 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 EIF2B4Q9UI10 523 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MBD1Q9UIS9 605 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CDH22Q9UJ99 828 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 ADAMTS6Q9UKP5 1117 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SARDHQ9UL12 918 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CDH7Q9ULB5 785 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PPM1HQ9ULR3 514 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 G3BP2Q9UN86 482 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 FIS1Q9Y3D6 152 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 L3MBTL1Q9Y468 752 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 EDDM13A0A1B0GTR0 161 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 NCF1BA6NI72 391 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 NCF1CA8MVU1 366 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FADS2P1A8MWK0 482 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 H0Y858 1186 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 PSMD12O00232 456 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FBP2O00757 339 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 OR7A17O14581 309 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 AREL1O15033 823 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 SLC16A5O15375 505 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 KRT36O76013 467 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 MATN4O95460 622 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 PRNPP04156 253 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ENO2P09104 434 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 OR56A5P0C7T3 313 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ATP1B2P14415 290 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 NCF1P14598 390 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 EZRP15311 586 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 VCLP18206 1134 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ITGB7P26010 798 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 GGT5P36269 586 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 OPRD1P41143 372 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ST8SIA6P61647 398 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 TRAF3Q13114 568 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 LRP8Q14114 963 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FASTKQ14296 549 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 GRB7Q14451 532 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 RAB30Q15771 203 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 GSTA3Q16772 222 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 C18orf21Q32NC0 220 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF658BQ4V348 819 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FBXO48Q5FWF7 155 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 LRRC73Q5JTD7 316 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 PLEKHS1Q5SXH7 462 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 TANGO2Q6ICL3 276 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ANKRD54Q6NXT1 300 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms