RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SYT16Q17RD7 645 aa17.59■□□□□ 0.41
APP-202ENST00000348990 COQ5Q5HYK3 327 aa17.59■□□□□ 0.41
APP-202ENST00000348990 COLEC12Q5KU26 742 aa17.59■□□□□ 0.41
APP-202ENST00000348990 DEPDC1Q5TB30 811 aa17.59■□□□□ 0.41
APP-202ENST00000348990 OR52B6Q8NGF0 335 aa17.59■□□□□ 0.41
APP-202ENST00000348990 PGAP3Q96FM1 320 aaPredicted RBP17.59■□□□□ 0.41
APP-202ENST00000348990 ATOH8Q96SQ7 321 aa17.59■□□□□ 0.41
APP-202ENST00000348990 DDX28Q9NUL7 540 aaKnown RBP17.59■□□□□ 0.41
APP-202ENST00000348990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.59■□□□□ 0.41
APP-202ENST00000348990 RLFQ13129 1914 aa17.59■□□□□ 0.41
APP-202ENST00000348990 FFAR3O14843 346 aa17.59■□□□□ 0.41
APP-202ENST00000348990 GPR42O15529 346 aa17.59■□□□□ 0.41
APP-202ENST00000348990 FDXRP22570 491 aa17.59■□□□□ 0.41
APP-202ENST00000348990 EPS8Q12929 822 aa17.59■□□□□ 0.41
APP-202ENST00000348990 TOP3AQ13472 1001 aaPredicted RBP17.59■□□□□ 0.41
APP-202ENST00000348990 SEMA3AQ14563 771 aa17.59■□□□□ 0.41
APP-202ENST00000348990 AP5B1Q2VPB7 878 aa17.59■□□□□ 0.41
APP-202ENST00000348990 ADHFE1Q8IWW8 467 aa17.59■□□□□ 0.41
APP-202ENST00000348990 PHACTR4Q8IZ21 702 aa17.59■□□□□ 0.41
APP-202ENST00000348990 PSD4Q8NDX1 1056 aa17.59■□□□□ 0.41
APP-202ENST00000348990 CLHC1Q8NHS4 586 aa17.59■□□□□ 0.41
APP-202ENST00000348990 ZNF599Q96NL3 588 aa17.59■□□□□ 0.41
APP-202ENST00000348990 CARS2Q9HA77 564 aaKnown RBP17.59■□□□□ 0.41
APP-202ENST00000348990 ZNF646O15015 1829 aaPredicted RBP17.59■□□□□ 0.41
APP-202ENST00000348990 DYTNA2CJ06 578 aa17.59■□□□□ 0.41
APP-202ENST00000348990 SLC22A1O15245 554 aa17.59■□□□□ 0.41
APP-202ENST00000348990 IRAK2O43187 625 aa17.59■□□□□ 0.41
APP-202ENST00000348990 CAPN1P07384 714 aa17.59■□□□□ 0.41
APP-202ENST00000348990 ALOX12P18054 663 aa17.59■□□□□ 0.41
APP-202ENST00000348990 RAPSNQ13702 412 aa17.59■□□□□ 0.41
APP-202ENST00000348990 ARMC8Q8IUR7 673 aa17.59■□□□□ 0.41
APP-202ENST00000348990 RIMKLAQ8IXN7 391 aa17.59■□□□□ 0.41
APP-202ENST00000348990 PAF1Q8N7H5 531 aa17.59■□□□□ 0.41
APP-202ENST00000348990 TFB2MQ9H5Q4 396 aaKnown RBP17.59■□□□□ 0.41
APP-202ENST00000348990 AKIP1Q9NQ31 210 aa17.59■□□□□ 0.41
APP-202ENST00000348990 TMA7Q9Y2S6 64 aaKnown RBP17.59■□□□□ 0.41
APP-202ENST00000348990 TRIM64BA6NI03 449 aa17.58■□□□□ 0.41
APP-202ENST00000348990 ARVCFO00192 962 aa17.58■□□□□ 0.41
APP-202ENST00000348990 NFKBIEO00221 500 aa17.58■□□□□ 0.41
APP-202ENST00000348990 FAM20BO75063 409 aa17.58■□□□□ 0.41
APP-202ENST00000348990 B3GAT3O94766 335 aa17.58■□□□□ 0.41
APP-202ENST00000348990 PCSK1P29120 753 aa17.58■□□□□ 0.41
APP-202ENST00000348990 RPL38P63173 70 aaKnown RBP17.58■□□□□ 0.41
APP-202ENST00000348990 KCNC4Q03721 635 aa17.58■□□□□ 0.41
APP-202ENST00000348990 SELENBP1Q13228 472 aa17.58■□□□□ 0.41
APP-202ENST00000348990 ZNF235Q14590 738 aa17.58■□□□□ 0.41
APP-202ENST00000348990 AGAP7PQ5VUJ5 663 aa17.58■□□□□ 0.41
APP-202ENST00000348990 SDHAF4Q5VUM1 108 aa17.58■□□□□ 0.41
APP-202ENST00000348990 RSBN1Q5VWQ0 802 aaPredicted RBP17.58■□□□□ 0.41
APP-202ENST00000348990 EFL1Q7Z2Z2 1120 aaKnown RBP17.58■□□□□ 0.41
APP-202ENST00000348990 MBOAT4Q96T53 435 aa17.58■□□□□ 0.41
APP-202ENST00000348990 ALOXE3Q9BYJ1 711 aa17.58■□□□□ 0.41
APP-202ENST00000348990 PAK1IP1Q9NWT1 392 aaPredicted RBP17.58■□□□□ 0.41
APP-202ENST00000348990 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.58■□□□□ 0.41
APP-202ENST00000348990 VAPAQ9P0L0 249 aa17.58■□□□□ 0.41
APP-202ENST00000348990 E5RI56 91 aa17.58■□□□□ 0.4
APP-202ENST00000348990 AGRPO00253 132 aa17.58■□□□□ 0.4
APP-202ENST00000348990 KERAO60938 352 aa17.58■□□□□ 0.4
APP-202ENST00000348990 SLC26A3P40879 764 aa17.58■□□□□ 0.4
APP-202ENST00000348990 HTR6P50406 440 aa17.58■□□□□ 0.4
APP-202ENST00000348990 NFKB2Q00653 900 aa17.58■□□□□ 0.4
APP-202ENST00000348990 ZNF33AQ06730 810 aa17.58■□□□□ 0.4
APP-202ENST00000348990 MAPKAPK3Q16644 382 aa17.58■□□□□ 0.4
APP-202ENST00000348990 TAPT1Q6NXT6 567 aa17.58■□□□□ 0.4
APP-202ENST00000348990 CYP20A1Q6UW02 462 aa17.58■□□□□ 0.4
APP-202ENST00000348990 CIR1Q86X95 450 aaPredicted RBP17.58■□□□□ 0.4
APP-202ENST00000348990 GPSM1Q86YR5 675 aa17.58■□□□□ 0.4
APP-202ENST00000348990 RTL3Q8N8U3 475 aaKnown RBP17.58■□□□□ 0.4
APP-202ENST00000348990 DPF3Q92784 378 aa17.58■□□□□ 0.4
APP-202ENST00000348990 MYOCQ99972 504 aa17.58■□□□□ 0.4
APP-202ENST00000348990 OSBPL10Q9BXB5 764 aa17.58■□□□□ 0.4
APP-202ENST00000348990 SCHIP1Q9P0W5 487 aaPredicted RBP17.58■□□□□ 0.4
APP-202ENST00000348990 ZNF639Q9UID6 485 aa17.58■□□□□ 0.4
APP-202ENST00000348990 ERVK-11Q9UQG0 969 aa17.58■□□□□ 0.4
APP-202ENST00000348990 NDUFB5O43674 189 aa17.57■□□□□ 0.4
APP-202ENST00000348990 GPR32O75388 356 aa17.57■□□□□ 0.4
APP-202ENST00000348990 GUCA1CO95843 209 aa17.57■□□□□ 0.4
APP-202ENST00000348990 IMP4Q96G21 291 aaKnown RBP17.57■□□□□ 0.4
APP-202ENST00000348990 IKZF3Q9UKT9 509 aa17.57■□□□□ 0.4
APP-202ENST00000348990 TPRKBQ9Y3C4 175 aa17.57■□□□□ 0.4
APP-202ENST00000348990 PRMT5O14744 637 aaPredicted RBP17.57■□□□□ 0.4
APP-202ENST00000348990 AKT1P31749 480 aa17.57■□□□□ 0.4
APP-202ENST00000348990 PTGR1Q14914 329 aa17.57■□□□□ 0.4
APP-202ENST00000348990 NKG7Q16617 165 aa17.57■□□□□ 0.4
APP-202ENST00000348990 CATSPEREQ5SY80 951 aa17.57■□□□□ 0.4
APP-202ENST00000348990 ATAD3BQ5T9A4 648 aa17.57■□□□□ 0.4
APP-202ENST00000348990 MIB1Q86YT6 1006 aa17.57■□□□□ 0.4
APP-202ENST00000348990 TSPEARQ8WU66 669 aa17.57■□□□□ 0.4
APP-202ENST00000348990 KIAA1191Q96A73 305 aa17.57■□□□□ 0.4
APP-202ENST00000348990 B3GALT6Q96L58 329 aa17.57■□□□□ 0.4
APP-202ENST00000348990 PAAF1Q9BRP4 392 aa17.57■□□□□ 0.4
APP-202ENST00000348990 RHNO1Q9BSD3 238 aa17.57■□□□□ 0.4
APP-202ENST00000348990 ANKMY1Q9P2S6 941 aa17.57■□□□□ 0.4
APP-202ENST00000348990 ANGPTL3Q9Y5C1 460 aa17.57■□□□□ 0.4
APP-202ENST00000348990 HS3ST4Q9Y661 456 aa17.57■□□□□ 0.4
APP-202ENST00000348990 COL1A2P08123 1366 aa17.57■□□□□ 0.4
APP-202ENST00000348990 DNAJC25-GNG10A0A024R161 153 aa17.57■□□□□ 0.4
APP-202ENST00000348990 PTGESO14684 152 aa17.57■□□□□ 0.4
APP-202ENST00000348990 RAD51BO15315 384 aa17.57■□□□□ 0.4
APP-202ENST00000348990 DIRAS1O95057 198 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms