RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 SIPA1Q96FS4 1042 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 FAR2Q96K12 515 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 RILPQ96NA2 401 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 C1QTNF3Q9BXJ4 246 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 TRIM39Q9HCM9 518 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 ZDHHC2Q9UIJ5 367 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 MBD1Q9UIS9 605 aaPredicted RBP18.36■□□□□ 0.53
PTN-201ENST00000348225 FZD4Q9ULV1 537 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 NCKAP1Q9Y2A7 1128 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 UNC80Q8N2C7 3258 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 NCF1BA6NI72 391 aaPredicted RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 NCF1CA8MVU1 366 aaPredicted RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 MATN2O00339 956 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 HGSO14964 777 aaPredicted RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 HDAC3O15379 428 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 CDK14O94921 469 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 NCF1P14598 390 aaPredicted RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 HK3P52790 923 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 PPP1R3AQ16821 1122 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 BCL7AQ4VC05 210 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 LACTB2Q53H82 288 aaPredicted RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 SPDYAQ5MJ70 313 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 CYHR1Q6ZMK1 362 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 NEK10Q6ZWH5 1172 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 USP30Q70CQ3 517 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 MTDHQ86UE4 582 aaKnown RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 CUZD1Q86UP6 607 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 PELI3Q8N2H9 469 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 OR14C36Q8NHC7 312 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 SKA1Q96BD8 255 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 HIC2Q96JB3 615 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 ZNF514Q96K75 400 aaPredicted RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 GUCD1Q96NT3 240 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 CCM2Q9BSQ5 444 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 MYLK2Q9H1R3 596 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 COG4Q9H9E3 785 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 CD248Q9HCU0 757 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 UTP6Q9NYH9 597 aaKnown RBP18.35■□□□□ 0.53
PTN-201ENST00000348225 ZFP69BQ9UJL9 534 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 MMP17Q9ULZ9 603 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 MYO10Q9HD67 2058 aa18.35■□□□□ 0.53
PTN-201ENST00000348225 FFAR2O15552 330 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 VEGFDO43915 354 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 UBOX5O94941 541 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 SIX3O95343 332 aaPredicted RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 PCCBP05166 539 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 C8GP07360 202 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 RPS17P08708 135 aaKnown RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 C7P10643 843 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 ACADMP11310 421 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 VCLP18206 1134 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 SERPINB3P29508 390 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 CTSCP53634 463 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 MLF2Q15773 248 aaPredicted RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 PNCKQ6P2M8 343 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 TMEM220Q6QAJ8 160 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 PDPRQ8NCN5 879 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 C1QTNF7Q9BXJ2 289 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 SHCBP1LQ9BZQ2 653 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 SLC6A17Q9H1V8 727 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 RDH14Q9HBH5 336 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 PREBQ9HCU5 417 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 TNPO3Q9Y5L0 923 aaKnown RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 PABPN1LA6NDY0 278 aaKnown RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 LOC730098B7Z3J9 87 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 ZNF195O14628 629 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 CCDC22O60826 627 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 DIAPH2O60879 1101 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 ENO2P09104 434 aaPredicted RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 GSTM1P09488 218 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 TEAD1P28347 426 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 IDH3AP50213 366 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 ADPRHP54922 357 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 GSTM4Q03013 218 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 SGCGQ13326 291 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 SP140Q13342 867 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 WSCD2Q2TBF2 565 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 EPGNQ6UW88 154 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 MAVSQ7Z434 540 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 ADGRG6Q86SQ4 1221 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 BEND7Q8N7W2 519 aaPredicted RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 SKA2Q8WVK7 121 aaPredicted RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 STON2Q8WXE9 905 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 OR2AG1Q9H205 316 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 ADAMTS6Q9UKP5 1117 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 NDRG2Q9UN36 371 aaKnown RBP18.34■□□□□ 0.53
PTN-201ENST00000348225 DUSP12Q9UNI6 340 aa18.34■□□□□ 0.53
PTN-201ENST00000348225 TRPM6Q9BX84 2022 aa18.33■□□□□ 0.53
PTN-201ENST00000348225 SHISA7A6NL88 538 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 SLC16A5O15375 505 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 GPC4O75487 556 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 LCP2Q13094 533 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 GALNTL6Q49A17 601 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 NEK5Q6P3R8 708 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 ZNF852Q6ZMS4 543 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 TRIM74Q86UV6 250 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 HEATR4Q86WZ0 1026 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 PLA2G15Q8NCC3 412 aa18.33■□□□□ 0.52
PTN-201ENST00000348225 GLMNQ92990 594 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms