RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 C1QTNF3-AMACRE9PGA6 284 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 ARP10275 920 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 CBX2Q14781 532 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-201ENST00000345617 CPSF6Q16630 551 aaKnown RBP eCLIP19.15■□□□□ 0.66
HDAC4-201ENST00000345617 RAET1GQ6H3X3 334 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 RAB12Q6IQ22 244 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 EBF3Q9H4W6 596 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 TNFSF13BQ9Y275 285 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 MAGEB17A8MXT2 336 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 CRADDP78560 199 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 NFIXQ14938 502 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 MOGQ16653 247 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 SHC3Q92529 594 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 TRPV4Q9HBA0 871 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 DIP2BQ9P265 1576 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 FOXM1Q08050 763 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 HMBOX1Q6NT76 420 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 ERVK-5Q9HDB9 667 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 MAGED1Q9Y5V3 778 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-201ENST00000345617 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 FSCN2O14926 492 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 CAPZA1P52907 286 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 IDNKQ5T6J7 187 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 SPERTQ8NA61 448 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 TNKS2Q9H2K2 1166 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 SOHLH2Q9NX45 425 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 KAT2AQ92830 837 aa19.14■□□□□ 0.66
HDAC4-201ENST00000345617 CXorf40BQ96DE9 158 aa19.14■□□□□ 0.66
HDAC4-201ENST00000345617 RDH8Q9NYR8 311 aa19.14■□□□□ 0.66
HDAC4-201ENST00000345617 TLX3O43711 291 aaPredicted RBP19.14■□□□□ 0.66
HDAC4-201ENST00000345617 CYP11A1P05108 521 aa19.14■□□□□ 0.66
HDAC4-201ENST00000345617 KIAA0100Q14667 2235 aaKnown RBP19.14■□□□□ 0.65
HDAC4-201ENST00000345617 MECP2P51608 486 aaKnown RBP19.14■□□□□ 0.65
HDAC4-201ENST00000345617 OMDQ99983 421 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 LRRC42Q9Y546 428 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 AGR2O95994 175 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 FOSL1P15407 271 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 GNA12Q03113 381 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 GPR65Q8IYL9 337 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 OR5K1Q8NHB7 308 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 L7N2F9 121 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 DDX6P26196 483 aaKnown RBP eCLIP19.14■□□□□ 0.652e-8■■■■■ 260
HDAC4-201ENST00000345617 GNG2P59768 71 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 VAMP2P63027 116 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 SUSD6Q92537 303 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 SMG7Q92540 1137 aaKnown RBP19.14■□□□□ 0.65
HDAC4-201ENST00000345617 COPS8Q99627 209 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 KCTD5Q9NXV2 234 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 B8ZZF3 427 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 OGFRL1Q5TC84 451 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-201ENST00000345617 FAM171A1Q5VUB5 890 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 ADAMTS15Q8TE58 950 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 DNASE1L2Q92874 299 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 PSKH2Q96QS6 385 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 CYP17A1P05093 508 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 HOXC12P31275 282 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 RAB5BP61020 215 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 LDLRAP1Q5SW96 308 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 CHST4Q8NCG5 386 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 SLC17A7Q9P2U7 560 aa19.14■□□□□ 0.65
HDAC4-201ENST00000345617 H0Y858 1186 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 PDPK1O15530 556 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 HCN1O60741 890 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CDH1P12830 882 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SRSF11Q05519 484 aaKnown RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 LRRC55Q6ZSA7 311 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 FAM83AQ86UY5 434 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SLC33A1O00400 549 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 ANXA8P13928 327 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CD72P21854 359 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 S100PP25815 95 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 ALG10Q5BKT4 473 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 DCLRE1AQ6PJP8 1040 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SGCDQ92629 289 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 NSMCE3Q96MG7 304 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SEMA3CQ99985 751 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 C1orf21Q9H246 121 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 TBC1D17Q9HA65 648 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 RPP40O75818 363 aaKnown RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 POMCP01189 267 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 GTF2BQ00403 316 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 ASTE1Q2TB18 679 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 PIGWQ7Z7B1 504 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 PHYKPLQ8IUZ5 450 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 TOR1AIP2Q8NFQ8 470 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 TCEAL4Q96EI5 215 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 METTL8Q9H825 291 aaKnown RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CTSEP14091 401 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 WEE1P30291 646 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 OGFOD2Q6N063 350 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 ADGRD2Q7Z7M1 963 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 DCAKDQ8WVC6 231 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SNRNP25Q9BV90 132 aaKnown RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 POFUT2Q9Y2G5 429 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 ILVBLA1L0T0 632 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 M0R233 179 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 PCDHGA12O60330 932 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SSR2P43308 183 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 STRADAQ7RTN6 431 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 FBXO16Q8IX29 292 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms