RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 OR2B6P58173 313 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 VGLL4Q14135 290 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 PPP1R15BQ5SWA1 713 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 ZDHHC21Q8IVQ6 265 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 CPT1BQ92523 772 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 AMBNQ9NP70 447 aa12.03□□□□□ -0.48
SEMA6A-202ENST00000343348 OR6C70A6NIJ9 312 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 INMTO95050 263 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 DCDC1P59894 354 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 PHC1P78364 1004 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 GNA12Q03113 381 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 OCLNQ16625 522 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 C9orf57Q5W0N0 161 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 ZNF627Q7L945 461 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 SLC26A9Q7LBE3 791 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 NR2E3Q9Y5X4 410 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 CHD1O14646 1710 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 AXIN1O15169 862 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 CCNB2O95067 398 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 AHCYP23526 432 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 PSMD8P48556 350 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 ACTR3P61158 418 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 APOBEC3HQ6NTF7 200 aaKnown RBP12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 PSRC1Q6PGN9 363 aaPredicted RBP12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 TMEM203Q969S6 136 aa12.02□□□□□ -0.48
SEMA6A-202ENST00000343348 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CLDN25C9JDP6 229 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CCRL2O00421 344 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 UGT1A9O60656 530 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CPNE3O75131 537 aaKnown RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 MAFO75444 373 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 GCATO75600 419 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 MT-CYBP00156 380 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 IFNW1P05000 195 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 PKMP14618 531 aaKnown RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 MAGEA12P43365 314 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 ZNF567Q8N184 647 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 DNAJA4Q8WW22 397 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 UGT1A7Q9HAW7 530 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 UGT1A10Q9HAW8 530 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 UGT1A8Q9HAW9 530 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 IFT80Q9P2H3 777 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 SLC17A6Q9P2U8 582 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 KIF20BQ96Q89 1820 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 ANXA2P2A6NMY6 339 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 SRRM3A6NNA2 597 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 TRAFD1O14545 582 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 OR1F1O43749 312 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 UGT2B4P06133 528 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 ANXA2P07355 339 aaKnown RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CREB1P16220 341 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 RPIAP49247 311 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 TEX44Q53QW1 395 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CCDC120Q96HB5 630 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 ZC3H10Q96K80 434 aaKnown RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 ERMAPQ96PL5 475 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 MGME1Q9BQP7 344 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 B3GNT4Q9C0J1 378 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CCL16O15467 120 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 ZNF208O43345 1280 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 PGAM2P15259 253 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 MAPK12P53778 367 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 IRF9Q00978 393 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 PCBP2Q15366 365 aaKnown RBP eCLIP12.02□□□□□ -0.497e-8■■■■■ 28
SEMA6A-202ENST00000343348 ARSHQ5FYA8 562 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 IQCHQ86VS3 1027 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 OR8D1Q8WZ84 308 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CYP2S1Q96SQ9 504 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 RNF208Q9H0X6 261 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 MYH10P35580 1976 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 E9PAM4 449 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 C1RP00736 705 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 IST1P53990 364 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CENPNQ96H22 339 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 UROC1Q96N76 676 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 CDK15Q96Q40 435 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 BARD1Q99728 777 aaKnown RBP12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 YIPF4Q9BSR8 244 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 GIN1Q9NXP7 522 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 KCTD5Q9NXV2 234 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 SPEF1Q9Y4P9 236 aa12.02□□□□□ -0.49
SEMA6A-202ENST00000343348 TEX46H3BTG2 121 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 TGFB1I1O43294 461 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 CST3P01034 146 aaPredicted RBP12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 RPLP0P05388 317 aaKnown RBP12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 SPATA31C1P0DKV0 1188 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 PRKCHP24723 683 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 AP3S2P59780 193 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 PPP3R1P63098 170 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 CLEC12AQ5QGZ9 265 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 PLPP4Q5VZY2 271 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 NAPRTQ6XQN6 538 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 TRIM2Q9C040 744 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 MAU2Q9Y6X3 613 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 LOC100509620A0A075B734 347 aa12.01□□□□□ -0.49
SEMA6A-202ENST00000343348 SMIM30A4D0T7 59 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms